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Integrated RNA and DNA sequencing improves mutation detection in low purity tumors.
Wilkerson MD, Cabanski CR, Sun W, Hoadley KA, Walter V, Mose LE, Troester MA, Hammerman PS, Parker JS, Perou CM, Hayes DN. Wilkerson MD, et al. Among authors: sun w. Nucleic Acids Res. 2014 Jul;42(13):e107. doi: 10.1093/nar/gku489. Epub 2014 Jun 26. Nucleic Acids Res. 2014. PMID: 24970867 Free PMC article.
Allele-specific copy number analysis of tumors.
Van Loo P, Nordgard SH, Lingjærde OC, Russnes HG, Rye IH, Sun W, Weigman VJ, Marynen P, Zetterberg A, Naume B, Perou CM, Børresen-Dale AL, Kristensen VN. Van Loo P, et al. Among authors: sun w. Proc Natl Acad Sci U S A. 2010 Sep 28;107(39):16910-5. doi: 10.1073/pnas.1009843107. Epub 2010 Sep 13. Proc Natl Acad Sci U S A. 2010. PMID: 20837533 Free PMC article.
Cell type-aware analysis of RNA-seq data.
Jin C, Chen M, Lin D, Sun W. Jin C, et al. Among authors: sun w. Nat Comput Sci. 2021 Apr;1(4):253-261. doi: 10.1038/s43588-021-00055-6. Epub 2021 Apr 15. Nat Comput Sci. 2021. PMID: 34957416 Free PMC article.
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