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EUCLID: automatic classification of proteins in functional classes by their database annotations.
Tamames J, Ouzounis C, Casari G, Sander C, Valencia A. Tamames J, et al. Among authors: valencia a. Bioinformatics. 1998;14(6):542-3. doi: 10.1093/bioinformatics/14.6.542. Bioinformatics. 1998. PMID: 9694995
A tool is described for the automatic classification of sequences in functional classes using their database annotations. The Euclid system is based on a simple learning procedure from examples provided by human experts. ...
A tool is described for the automatic classification of sequences in functional classes using their database annotations. The Euclid …
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Blaschke C, Yeh A, Camon E, Colosimo M, Apweiler R, Hirschman L, Valencia A. Blaschke C, et al. Among authors: valencia a. Bioinformatics. 2005 Dec 1;21(23):4199-200. doi: 10.1093/bioinformatics/bti695. Epub 2005 Sep 29. Bioinformatics. 2005. PMID: 16195360 No abstract available.
Phylogeny-independent detection of functional residues.
Pazos F, Rausell A, Valencia A. Pazos F, et al. Among authors: valencia a. Bioinformatics. 2006 Jun 15;22(12):1440-8. doi: 10.1093/bioinformatics/btl104. Epub 2006 Mar 21. Bioinformatics. 2006. PMID: 16551661
CARGO: a web portal to integrate customized biological information.
Cases I, Pisano DG, Andres E, Carro A, Fernández JM, Gómez-López G, Rodriguez JM, Vera JF, Valencia A, Rojas AM. Cases I, et al. Among authors: valencia a. Nucleic Acids Res. 2007 Jul;35(Web Server issue):W16-20. doi: 10.1093/nar/gkm280. Epub 2007 May 5. Nucleic Acids Res. 2007. PMID: 17483515 Free PMC article.
The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text.
Krallinger M, Vazquez M, Leitner F, Salgado D, Chatr-Aryamontri A, Winter A, Perfetto L, Briganti L, Licata L, Iannuccelli M, Castagnoli L, Cesareni G, Tyers M, Schneider G, Rinaldi F, Leaman R, Gonzalez G, Matos S, Kim S, Wilbur WJ, Rocha L, Shatkay H, Tendulkar AV, Agarwal S, Liu F, Wang X, Rak R, Noto K, Elkan C, Lu Z, Dogan RI, Fontaine JF, Andrade-Navarro MA, Valencia A. Krallinger M, et al. Among authors: valencia a. BMC Bioinformatics. 2011 Oct 3;12 Suppl 8(Suppl 8):S3. doi: 10.1186/1471-2105-12-S8-S3. BMC Bioinformatics. 2011. PMID: 22151929 Free PMC article.
937 results