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GeneHancer: genome-wide integration of enhancers and target genes in GeneCards.
Fishilevich S, Nudel R, Rappaport N, Hadar R, Plaschkes I, Iny Stein T, Rosen N, Kohn A, Twik M, Safran M, Lancet D, Cohen D. Fishilevich S, et al. Among authors: nudel r. Database (Oxford). 2017 Jan 1;2017:bax028. doi: 10.1093/database/bax028. Database (Oxford). 2017. PMID: 28605766 Free PMC article.
The GeneCards Suite: From Gene Data Mining to Disease Genome Sequence Analyses.
Stelzer G, Rosen N, Plaschkes I, Zimmerman S, Twik M, Fishilevich S, Stein TI, Nudel R, Lieder I, Mazor Y, Kaplan S, Dahary D, Warshawsky D, Guan-Golan Y, Kohn A, Rappaport N, Safran M, Lancet D. Stelzer G, et al. Among authors: nudel r. Curr Protoc Bioinformatics. 2016 Jun 20;54:1.30.1-1.30.33. doi: 10.1002/cpbi.5. Curr Protoc Bioinformatics. 2016. PMID: 27322403
VarElect: the phenotype-based variation prioritizer of the GeneCards Suite.
Stelzer G, Plaschkes I, Oz-Levi D, Alkelai A, Olender T, Zimmerman S, Twik M, Belinky F, Fishilevich S, Nudel R, Guan-Golan Y, Warshawsky D, Dahary D, Kohn A, Mazor Y, Kaplan S, Iny Stein T, Baris HN, Rappaport N, Safran M, Lancet D. Stelzer G, et al. Among authors: nudel r. BMC Genomics. 2016 Jun 23;17 Suppl 2(Suppl 2):444. doi: 10.1186/s12864-016-2722-2. BMC Genomics. 2016. PMID: 27357693 Free PMC article.
Genome-wide association study identifies 16 genomic regions associated with circulating cytokines at birth.
Wang Y, Nudel R, Benros ME, Skogstrand K, Fishilevich S; iPSYCH-BROAD; Lancet D, Sun J, Hougaard DM, Andreassen OA, Mortensen PB, Buil A, Hansen TF, Thompson WK, Werge T. Wang Y, et al. Among authors: nudel r. PLoS Genet. 2020 Nov 23;16(11):e1009163. doi: 10.1371/journal.pgen.1009163. eCollection 2020 Nov. PLoS Genet. 2020. PMID: 33227023 Free PMC article.
Variants in the fetal genome near pro-inflammatory cytokine genes on 2q13 associate with gestational duration.
Liu X, Helenius D, Skotte L, Beaumont RN, Wielscher M, Geller F, Juodakis J, Mahajan A, Bradfield JP, Lin FTJ, Vogelezang S, Bustamante M, Ahluwalia TS, Pitkänen N, Wang CA, Bacelis J, Borges MC, Zhang G, Bedell BA, Rossi RM, Skogstrand K, Peng S, Thompson WK, Appadurai V, Lawlor DA, Kalliala I, Power C, McCarthy MI, Boyd HA, Marazita ML, Hakonarson H, Hayes MG, Scholtens DM, Rivadeneira F, Jaddoe VWV, Vinding RK, Bisgaard H, Knight BA, Pahkala K, Raitakari O, Helgeland Ø, Johansson S, Njølstad PR, Fadista J, Schork AJ, Nudel R, Miller DE, Chen X, Weirauch MT, Mortensen PB, Børglum AD, Nordentoft M, Mors O, Hao K, Ryckman KK, Hougaard DM, Kottyan LC, Pennell CE, Lyytikainen LP, Bønnelykke K, Vrijheid M, Felix JF, Lowe WL Jr, Grant SFA, Hyppönen E, Jacobsson B, Jarvelin MR, Muglia LJ, Murray JC, Freathy RM, Werge TM, Melbye M, Buil A, Feenstra B. Liu X, et al. Among authors: nudel r. Nat Commun. 2019 Sep 2;10(1):3927. doi: 10.1038/s41467-019-11881-8. Nat Commun. 2019. PMID: 31477735 Free PMC article.
A genome-wide association study of shared risk across psychiatric disorders implicates gene regulation during fetal neurodevelopment.
Schork AJ, Won H, Appadurai V, Nudel R, Gandal M, Delaneau O, Revsbech Christiansen M, Hougaard DM, Bækved-Hansen M, Bybjerg-Grauholm J, Giørtz Pedersen M, Agerbo E, Bøcker Pedersen C, Neale BM, Daly MJ, Wray NR, Nordentoft M, Mors O, Børglum AD, Bo Mortensen P, Buil A, Thompson WK, Geschwind DH, Werge T. Schork AJ, et al. Among authors: nudel r. Nat Neurosci. 2019 Mar;22(3):353-361. doi: 10.1038/s41593-018-0320-0. Epub 2019 Jan 28. Nat Neurosci. 2019. PMID: 30692689 Free PMC article.
Genome-wide association analyses of child genotype effects and parent-of-origin effects in specific language impairment.
Nudel R, Simpson NH, Baird G, O'Hare A, Conti-Ramsden G, Bolton PF, Hennessy ER; SLI Consortium; Ring SM, Davey Smith G, Francks C, Paracchini S, Monaco AP, Fisher SE, Newbury DF. Nudel R, et al. Genes Brain Behav. 2014 Apr;13(4):418-29. doi: 10.1111/gbb.12127. Epub 2014 Mar 24. Genes Brain Behav. 2014. PMID: 24571439 Free PMC article.
45 results