Zarrineh P - Search Results

1

A tissue-specific, Gata6-driven transcriptional program instructs remodeling of the mature arterial tree.

Losa M, Latorre V, Andrabi M, Ladam F, Sagerström C, Novoa A, Zarrineh P, Bridoux L, Hanley NA, Mallo M, Bobola N. Losa M, et al. Among authors: zarrineh p. Elife. 2017 Sep 27;6:e31362. doi: 10.7554/eLife.31362. Elife. 2017. PMID: 28952437 Free PMC article.

2

Uncovering tissue-specific binding features from differential deep learning.

Phuycharoen M, Zarrineh P, Bridoux L, Amin S, Losa M, Chen K, Bobola N, Rattray M. Phuycharoen M, et al. Among authors: zarrineh p. Nucleic Acids Res. 2020 Mar 18;48(5):e27. doi: 10.1093/nar/gkaa009. Nucleic Acids Res. 2020. PMID: 31974574 Free PMC article.

3

Dynamic changes in the epigenomic landscape regulate human organogenesis and link to developmental disorders.

Gerrard DT, Berry AA, Jennings RE, Birket MJ, Zarrineh P, Garstang MG, Withey SL, Short P, Jiménez-Gancedo S, Firbas PN, Donaldson I, Sharrocks AD, Hanley KP, Hurles ME, Gomez-Skarmeta JL, Bobola N, Hanley NA. Gerrard DT, et al. Among authors: zarrineh p. Nat Commun. 2020 Aug 6;11(1):3920. doi: 10.1038/s41467-020-17305-2. Nat Commun. 2020. PMID: 32764605 Free PMC article.

4

HOX paralogs selectively convert binding of ubiquitous transcription factors into tissue-specific patterns of enhancer activation.

Bridoux L, Zarrineh P, Mallen J, Phuycharoen M, Latorre V, Ladam F, Losa M, Baker SM, Sagerstrom C, Mace KA, Rattray M, Bobola N. Bridoux L, et al. Among authors: zarrineh p. PLoS Genet. 2020 Dec 14;16(12):e1009162. doi: 10.1371/journal.pgen.1009162. eCollection 2020 Dec. PLoS Genet. 2020. PMID: 33315856 Free PMC article.

5

Molecular Characterization of HOXA2 and HOXA3 Binding Properties.

Mallen J, Kalsan M, Zarrineh P, Bridoux L, Ahmad S, Bobola N. Mallen J, et al. Among authors: zarrineh p. J Dev Biol. 2021 Dec 3;9(4):55. doi: 10.3390/jdb9040055. J Dev Biol. 2021. PMID: 34940502 Free PMC article.

6

A spatio-temporally constrained gene regulatory network directed by PBX1/2 acquires limb patterning specificity via HAND2.

Losa M, Barozzi I, Osterwalder M, Hermosilla-Aguayo V, Morabito A, Chacón BH, Zarrineh P, Girdziusaite A, Benazet JD, Zhu J, Mackem S, Capellini TD, Dickel D, Bobola N, Zuniga A, Visel A, Zeller R, Selleri L. Losa M, et al. Among authors: zarrineh p. Nat Commun. 2023 Jul 6;14(1):3993. doi: 10.1038/s41467-023-39443-z. Nat Commun. 2023. PMID: 37414772 Free PMC article.

7

Analysis of chromatin organization and gene expression in T cells identifies functional genes for rheumatoid arthritis.

Yang J, McGovern A, Martin P, Duffus K, Ge X, Zarrineh P, Morris AP, Adamson A, Fraser P, Rattray M, Eyre S. Yang J, et al. Among authors: zarrineh p. Nat Commun. 2020 Sep 2;11(1):4402. doi: 10.1038/s41467-020-18180-7. Nat Commun. 2020. PMID: 32879318 Free PMC article.

8

Predicting brain network changes in Alzheimer's disease with link prediction algorithms.

Sulaimany S, Khansari M, Zarrineh P, Daianu M, Jahanshad N, Thompson PM, Masoudi-Nejad A. Sulaimany S, et al. Among authors: zarrineh p. Mol Biosyst. 2017 Mar 28;13(4):725-735. doi: 10.1039/c6mb00815a. Mol Biosyst. 2017. PMID: 28197591 Free PMC article.

9

Genome-scale co-expression network comparison across Escherichia coli and Salmonella enterica serovar Typhimurium reveals significant conservation at the regulon level of local regulators despite their dissimilar lifestyles.

Zarrineh P, Sánchez-Rodríguez A, Hosseinkhan N, Narimani Z, Marchal K, Masoudi-Nejad A. Zarrineh P, et al. PLoS One. 2014 Aug 7;9(8):e102871. doi: 10.1371/journal.pone.0102871. eCollection 2014. PLoS One. 2014. PMID: 25101984 Free PMC article.

10

Analysis of Genome-scale Expression Network in Four Major Bacterial Residents of Cystic Fibrosis Lung.

Hosseinkhan N, Zarrineh P, Masoudi-Nejad A. Hosseinkhan N, et al. Among authors: zarrineh p. Curr Genomics. 2014 Oct;15(5):408-18. doi: 10.2174/1389202915666140818205444. Curr Genomics. 2014. PMID: 25435803 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

14 results

Search Page