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MGIS: managing banana (Musa spp.) genetic resources information and high-throughput genotyping data.
Ruas M, Guignon V, Sempere G, Sardos J, Hueber Y, Duvergey H, Andrieu A, Chase R, Jenny C, Hazekamp T, Irish B, Jelali K, Adeka J, Ayala-Silva T, Chao CP, Daniells J, Dowiya B, Effa Effa B, Gueco L, Herradura L, Ibobondji L, Kempenaers E, Kilangi J, Muhangi S, Ngo Xuan P, Paofa J, Pavis C, Thiemele D, Tossou C, Sandoval J, Sutanto A, Vangu Paka G, Yi G, Van den Houwe I, Roux N, Rouard M. Ruas M, et al. Among authors: sandoval j. Database (Oxford). 2017 Jan 1;2017:bax046. doi: 10.1093/database/bax046. Database (Oxford). 2017. PMID: 29220435 Free PMC article.
Robust single-cell DNA methylome profiling with snmC-seq2.
Luo C, Rivkin A, Zhou J, Sandoval JP, Kurihara L, Lucero J, Castanon R, Nery JR, Pinto-Duarte A, Bui B, Fitzpatrick C, O'Connor C, Ruga S, Van Eden ME, Davis DA, Mash DC, Behrens MM, Ecker JR. Luo C, et al. Among authors: sandoval jp. Nat Commun. 2018 Sep 20;9(1):3824. doi: 10.1038/s41467-018-06355-2. Nat Commun. 2018. PMID: 30237449 Free PMC article.
The complex architecture and epigenomic impact of plant T-DNA insertions.
Jupe F, Rivkin AC, Michael TP, Zander M, Motley ST, Sandoval JP, Slotkin RK, Chen H, Castanon R, Nery JR, Ecker JR. Jupe F, et al. PLoS Genet. 2019 Jan 18;15(1):e1007819. doi: 10.1371/journal.pgen.1007819. eCollection 2019 Jan. PLoS Genet. 2019. PMID: 30657772 Free PMC article.
Iterative single-cell multi-omic integration using online learning.
Gao C, Liu J, Kriebel AR, Preissl S, Luo C, Castanon R, Sandoval J, Rivkin A, Nery JR, Behrens MM, Ecker JR, Ren B, Welch JD. Gao C, et al. Among authors: sandoval j. Nat Biotechnol. 2021 Aug;39(8):1000-1007. doi: 10.1038/s41587-021-00867-x. Epub 2021 Apr 19. Nat Biotechnol. 2021. PMID: 33875866 Free PMC article.
Genome and time-of-day transcriptome of Wolffia australiana link morphological minimization with gene loss and less growth control.
Michael TP, Ernst E, Hartwick N, Chu P, Bryant D, Gilbert S, Ortleb S, Baggs EL, Sree KS, Appenroth KJ, Fuchs J, Jupe F, Sandoval JP, Krasileva KV, Borisjuk L, Mockler TC, Ecker JR, Martienssen RA, Lam E. Michael TP, et al. Among authors: sandoval jp. Genome Res. 2021 Feb;31(2):225-238. doi: 10.1101/gr.266429.120. Epub 2020 Dec 23. Genome Res. 2021. PMID: 33361111 Free PMC article.
Genome-Wide DNA Methylation in Early-Onset-Dementia Patients Brain Tissue and Lymphoblastoid Cell Lines.
Ramos-Campoy O, Comas-Albertí A, Hervás D, Borrego-Écija S, Bosch B, Sandoval J, Fort-Aznar L, Moreno-Izco F, Fernández-Villullas G, Molina-Porcel L, Balasa M, Lladó A, Sánchez-Valle R, Antonell A. Ramos-Campoy O, et al. Among authors: sandoval j. Int J Mol Sci. 2024 May 16;25(10):5445. doi: 10.3390/ijms25105445. Int J Mol Sci. 2024. PMID: 38791483 Free PMC article.
693 results