Zhang K - Search Results

1

Integrative single-cell analysis of transcriptional and epigenetic states in the human adult brain.

Lake BB, Chen S, Sos BC, Fan J, Kaeser GE, Yung YC, Duong TE, Gao D, Chun J, Kharchenko PV, Zhang K. Lake BB, et al. Among authors: zhang k. Nat Biotechnol. 2018 Jan;36(1):70-80. doi: 10.1038/nbt.4038. Epub 2017 Dec 11. Nat Biotechnol. 2018. PMID: 29227469 Free PMC article.

2

Multiplex amplification of large sets of human exons.

Porreca GJ, Zhang K, Li JB, Xie B, Austin D, Vassallo SL, LeProust EM, Peck BJ, Emig CJ, Dahl F, Gao Y, Church GM, Shendure J. Porreca GJ, et al. Among authors: zhang k. Nat Methods. 2007 Nov;4(11):931-6. doi: 10.1038/nmeth1110. Epub 2007 Oct 14. Nat Methods. 2007. PMID: 17934468

3

Targeted bisulfite sequencing reveals changes in DNA methylation associated with nuclear reprogramming.

Deng J, Shoemaker R, Xie B, Gore A, LeProust EM, Antosiewicz-Bourget J, Egli D, Maherali N, Park IH, Yu J, Daley GQ, Eggan K, Hochedlinger K, Thomson J, Wang W, Gao Y, Zhang K. Deng J, et al. Among authors: zhang k. Nat Biotechnol. 2009 Apr;27(4):353-60. doi: 10.1038/nbt.1530. Epub 2009 Mar 29. Nat Biotechnol. 2009. PMID: 19330000 Free PMC article.

4

Digital RNA allelotyping reveals tissue-specific and allele-specific gene expression in human.

Zhang K, Li JB, Gao Y, Egli D, Xie B, Deng J, Li Z, Lee JH, Aach J, Leproust EM, Eggan K, Church GM. Zhang K, et al. Nat Methods. 2009 Aug;6(8):613-8. doi: 10.1038/nmeth.1357. Epub 2009 Jul 20. Nat Methods. 2009. PMID: 19620972 Free PMC article.

5

Somatic coding mutations in human induced pluripotent stem cells.

Gore A, Li Z, Fung HL, Young JE, Agarwal S, Antosiewicz-Bourget J, Canto I, Giorgetti A, Israel MA, Kiskinis E, Lee JH, Loh YH, Manos PD, Montserrat N, Panopoulos AD, Ruiz S, Wilbert ML, Yu J, Kirkness EF, Izpisua Belmonte JC, Rossi DJ, Thomson JA, Eggan K, Daley GQ, Goldstein LS, Zhang K. Gore A, et al. Among authors: zhang k. Nature. 2011 Mar 3;471(7336):63-7. doi: 10.1038/nature09805. Nature. 2011. PMID: 21368825 Free PMC article.

6

Library-free methylation sequencing with bisulfite padlock probes.

Diep D, Plongthongkum N, Gore A, Fung HL, Shoemaker R, Zhang K. Diep D, et al. Among authors: zhang k. Nat Methods. 2012 Feb 5;9(3):270-2. doi: 10.1038/nmeth.1871. Nat Methods. 2012. PMID: 22306810 Free PMC article.

7

Massively parallel polymerase cloning and genome sequencing of single cells using nanoliter microwells.

Gole J, Gore A, Richards A, Chiu YJ, Fung HL, Bushman D, Chiang HI, Chun J, Lo YH, Zhang K. Gole J, et al. Among authors: zhang k. Nat Biotechnol. 2013 Dec;31(12):1126-32. doi: 10.1038/nbt.2720. Epub 2013 Nov 10. Nat Biotechnol. 2013. PMID: 24213699 Free PMC article.

8

Advances in the profiling of DNA modifications: cytosine methylation and beyond.

Plongthongkum N, Diep DH, Zhang K. Plongthongkum N, et al. Among authors: zhang k. Nat Rev Genet. 2014 Oct;15(10):647-61. doi: 10.1038/nrg3772. Epub 2014 Aug 27. Nat Rev Genet. 2014. PMID: 25159599 Review.

9

Characterizing transcriptional heterogeneity through pathway and gene set overdispersion analysis.

Fan J, Salathia N, Liu R, Kaeser GE, Yung YC, Herman JL, Kaper F, Fan JB, Zhang K, Chun J, Kharchenko PV. Fan J, et al. Among authors: zhang k. Nat Methods. 2016 Mar;13(3):241-4. doi: 10.1038/nmeth.3734. Epub 2016 Jan 18. Nat Methods. 2016. PMID: 26780092 Free PMC article.

10

Characterization of chromatin accessibility with a transposome hypersensitive sites sequencing (THS-seq) assay.

Sos BC, Fung HL, Gao DR, Osothprarop TF, Kia A, He MM, Zhang K. Sos BC, et al. Among authors: zhang k. Genome Biol. 2016 Feb 4;17:20. doi: 10.1186/s13059-016-0882-7. Genome Biol. 2016. PMID: 26846207 Free PMC article.

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