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SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification.
Tardaguila M, de la Fuente L, Marti C, Pereira C, Pardo-Palacios FJ, Del Risco H, Ferrell M, Mellado M, Macchietto M, Verheggen K, Edelmann M, Ezkurdia I, Vazquez J, Tress M, Mortazavi A, Martens L, Rodriguez-Navarro S, Moreno-Manzano V, Conesa A. Tardaguila M, et al. Genome Res. 2018 Feb 9;28(3):396-411. doi: 10.1101/gr.222976.117. Online ahead of print. Genome Res. 2018. PMID: 29440222 Free PMC article.
Corrigendum: SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification.
Tardaguila M, de la Fuente L, Marti C, Pereira C, Pardo-Palacios FJ, Del Risco H, Ferrell M, Mellado M, Macchietto M, Verheggen K, Edelmann M, Ezkurdia I, Vazquez J, Tress M, Mortazavi A, Martens L, Rodriguez-Navarro S, Moreno-Manzano V, Conesa A. Tardaguila M, et al. Among authors: rodriguez navarro s. Genome Res. 2018 Jul;28(7):1096. doi: 10.1101/gr.239137.118. Genome Res. 2018. PMID: 29967126 Free PMC article. No abstract available.
Mip6 binds directly to the Mex67 UBA domain to maintain low levels of Msn2/4 stress-dependent mRNAs.
Martín-Expósito M, Gas ME, Mohamad N, Nuño-Cabanes C, Tejada-Colón A, Pascual-García P, de la Fuente L, Chaves-Arquero B, Merran J, Corden J, Conesa A, Pérez-Cañadillas JM, Bravo J, Rodríguez-Navarro S. Martín-Expósito M, et al. Among authors: rodriguez navarro s. EMBO Rep. 2019 Dec 5;20(12):e47964. doi: 10.15252/embr.201947964. Epub 2019 Nov 3. EMBO Rep. 2019. PMID: 31680439 Free PMC article.
mRNA export and gene expression: the SAGA-TREX-2 connection.
García-Oliver E, García-Molinero V, Rodríguez-Navarro S. García-Oliver E, et al. Biochim Biophys Acta. 2012 Jun;1819(6):555-65. doi: 10.1016/j.bbagrm.2011.11.011. Epub 2011 Dec 8. Biochim Biophys Acta. 2012. PMID: 22178374 Review.
SAGA-CORE subunit Spt7 is required for correct Ubp8 localization, chromatin association and deubiquitinase activity.
Nuño-Cabanes C, García-Molinero V, Martín-Expósito M, Gas ME, Oliete-Calvo P, García-Oliver E, de la Iglesia-Vayá M, Rodríguez-Navarro S. Nuño-Cabanes C, et al. Among authors: rodriguez navarro s. Epigenetics Chromatin. 2020 Oct 28;13(1):46. doi: 10.1186/s13072-020-00367-3. Epigenetics Chromatin. 2020. PMID: 33115507 Free PMC article.
SUS1 introns are required for efficient mRNA nuclear export in yeast.
Cuenca-Bono B, García-Molinero V, Pascual-García P, Dopazo H, Llopis A, Vilardell J, Rodríguez-Navarro S. Cuenca-Bono B, et al. Nucleic Acids Res. 2011 Oct;39(19):8599-611. doi: 10.1093/nar/gkr496. Epub 2011 Jul 12. Nucleic Acids Res. 2011. PMID: 21749979 Free PMC article.
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