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SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification.
Tardaguila M, de la Fuente L, Marti C, Pereira C, Pardo-Palacios FJ, Del Risco H, Ferrell M, Mellado M, Macchietto M, Verheggen K, Edelmann M, Ezkurdia I, Vazquez J, Tress M, Mortazavi A, Martens L, Rodriguez-Navarro S, Moreno-Manzano V, Conesa A. Tardaguila M, et al. Among authors: verheggen k. Genome Res. 2018 Feb 9;28(3):396-411. doi: 10.1101/gr.222976.117. Online ahead of print. Genome Res. 2018. PMID: 29440222 Free PMC article.
Corrigendum: SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification.
Tardaguila M, de la Fuente L, Marti C, Pereira C, Pardo-Palacios FJ, Del Risco H, Ferrell M, Mellado M, Macchietto M, Verheggen K, Edelmann M, Ezkurdia I, Vazquez J, Tress M, Mortazavi A, Martens L, Rodriguez-Navarro S, Moreno-Manzano V, Conesa A. Tardaguila M, et al. Among authors: verheggen k. Genome Res. 2018 Jul;28(7):1096. doi: 10.1101/gr.239137.118. Genome Res. 2018. PMID: 29967126 Free PMC article. No abstract available.
An update on LNCipedia: a database for annotated human lncRNA sequences.
Volders PJ, Verheggen K, Menschaert G, Vandepoele K, Martens L, Vandesompele J, Mestdagh P. Volders PJ, et al. Among authors: verheggen k. Nucleic Acids Res. 2015 Jan;43(Database issue):D174-80. doi: 10.1093/nar/gku1060. Epub 2014 Nov 5. Nucleic Acids Res. 2015. PMID: 25378313 Free PMC article.
LNCipedia 5: towards a reference set of human long non-coding RNAs.
Volders PJ, Anckaert J, Verheggen K, Nuytens J, Martens L, Mestdagh P, Vandesompele J. Volders PJ, et al. Among authors: verheggen k. Nucleic Acids Res. 2019 Jan 8;47(D1):D135-D139. doi: 10.1093/nar/gky1031. Nucleic Acids Res. 2019. PMID: 30371849 Free PMC article.
18 results