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Oasis 2: improved online analysis of small RNA-seq data.
Rahman RU, Gautam A, Bethune J, Sattar A, Fiosins M, Magruder DS, Capece V, Shomroni O, Bonn S. Rahman RU, et al. Among authors: shomroni o. BMC Bioinformatics. 2018 Feb 14;19(1):54. doi: 10.1186/s12859-018-2047-z. BMC Bioinformatics. 2018. PMID: 29444641 Free PMC article.
Oasis: online analysis of small RNA deep sequencing data.
Capece V, Garcia Vizcaino JC, Vidal R, Rahman RU, Pena Centeno T, Shomroni O, Suberviola I, Fischer A, Bonn S. Capece V, et al. Among authors: shomroni o. Bioinformatics. 2015 Jul 1;31(13):2205-7. doi: 10.1093/bioinformatics/btv113. Epub 2015 Feb 19. Bioinformatics. 2015. PMID: 25701573 Free PMC article.
DNA methylation changes in plasticity genes accompany the formation and maintenance of memory.
Halder R, Hennion M, Vidal RO, Shomroni O, Rahman RU, Rajput A, Centeno TP, van Bebber F, Capece V, Garcia Vizcaino JC, Schuetz AL, Burkhardt S, Benito E, Navarro Sala M, Javan SB, Haass C, Schmid B, Fischer A, Bonn S. Halder R, et al. Among authors: shomroni o. Nat Neurosci. 2016 Jan;19(1):102-10. doi: 10.1038/nn.4194. Epub 2015 Dec 14. Nat Neurosci. 2016. PMID: 26656643
Regional and subtype-dependent miRNA signatures in sporadic Creutzfeldt-Jakob disease are accompanied by alterations in miRNA silencing machinery and biogenesis.
Llorens F, Thüne K, Martí E, Kanata E, Dafou D, Díaz-Lucena D, Vivancos A, Shomroni O, Zafar S, Schmitz M, Michel U, Fernández-Borges N, Andréoletti O, Del Río JA, Díez J, Fischer A, Bonn S, Sklaviadis T, Torres JM, Ferrer I, Zerr I. Llorens F, et al. Among authors: shomroni o. PLoS Pathog. 2018 Jan 22;14(1):e1006802. doi: 10.1371/journal.ppat.1006802. eCollection 2018 Jan. PLoS Pathog. 2018. PMID: 29357384 Free PMC article.
TAp73 is a central transcriptional regulator of airway multiciliogenesis.
Nemajerova A, Kramer D, Siller SS, Herr C, Shomroni O, Pena T, Gallinas Suazo C, Glaser K, Wildung M, Steffen H, Sriraman A, Oberle F, Wienken M, Hennion M, Vidal R, Royen B, Alevra M, Schild D, Bals R, Dönitz J, Riedel D, Bonn S, Takemaru K, Moll UM, Lizé M. Nemajerova A, et al. Among authors: shomroni o. Genes Dev. 2016 Jun 1;30(11):1300-12. doi: 10.1101/gad.279836.116. Epub 2016 Jun 2. Genes Dev. 2016. PMID: 27257214 Free PMC article.
Transcription factor TAp73 and microRNA-449 complement each other to support multiciliogenesis.
Wildung M, Esser TU, Grausam KB, Wiedwald C, Volceanov-Hahn L, Riedel D, Beuermann S, Li L, Zylla J, Guenther AK, Wienken M, Ercetin E, Han Z, Bremmer F, Shomroni O, Andreas S, Zhao H, Lizé M. Wildung M, et al. Among authors: shomroni o. Cell Death Differ. 2019 Dec;26(12):2740-2757. doi: 10.1038/s41418-019-0332-7. Epub 2019 May 8. Cell Death Differ. 2019. PMID: 31068677 Free PMC article.
31 results