Dylus DV - Search Results

1

Developmental transcriptomics of the brittle star Amphiura filiformis reveals gene regulatory network rewiring in echinoderm larval skeleton evolution.

Dylus DV, Czarkwiani A, Blowes LM, Elphick MR, Oliveri P. Dylus DV, et al. Genome Biol. 2018 Feb 28;19(1):26. doi: 10.1186/s13059-018-1402-8. Genome Biol. 2018. PMID: 29490679 Free PMC article.

2

Expression of skeletogenic genes during arm regeneration in the brittle star Amphiura filiformis.

Czarkwiani A, Dylus DV, Oliveri P. Czarkwiani A, et al. Among authors: dylus dv. Gene Expr Patterns. 2013 Dec;13(8):464-72. doi: 10.1016/j.gep.2013.09.002. Epub 2013 Sep 16. Gene Expr Patterns. 2013. PMID: 24051028 Free PMC article.

3

Large-scale gene expression study in the ophiuroid Amphiura filiformis provides insights into evolution of gene regulatory networks.

Dylus DV, Czarkwiani A, Stångberg J, Ortega-Martinez O, Dupont S, Oliveri P. Dylus DV, et al. Evodevo. 2016 Jan 11;7:2. doi: 10.1186/s13227-015-0039-x. eCollection 2016. Evodevo. 2016. PMID: 26759711 Free PMC article.

4

Skeletal regeneration in the brittle star Amphiura filiformis.

Czarkwiani A, Ferrario C, Dylus DV, Sugni M, Oliveri P. Czarkwiani A, et al. Among authors: dylus dv. Front Zool. 2016 Apr 22;13:18. doi: 10.1186/s12983-016-0149-x. eCollection 2016. Front Zool. 2016. PMID: 27110269 Free PMC article.

5

Extracellular matrix gene expression during arm regeneration in Amphiura filiformis.

Ferrario C, Czarkwiani A, Dylus DV, Piovani L, Candia Carnevali MD, Sugni M, Oliveri P. Ferrario C, et al. Among authors: dylus dv. Cell Tissue Res. 2020 Sep;381(3):411-426. doi: 10.1007/s00441-020-03201-0. Epub 2020 Apr 30. Cell Tissue Res. 2020. PMID: 32350640

6

FGF signalling plays similar roles in development and regeneration of the skeleton in the brittle star Amphiura filiformis.

Czarkwiani A, Dylus DV, Carballo L, Oliveri P. Czarkwiani A, et al. Among authors: dylus dv. Development. 2021 May 15;148(10):dev180760. doi: 10.1242/dev.180760. Epub 2021 May 27. Development. 2021. PMID: 34042967 Free PMC article.

7

OMA standalone: orthology inference among public and custom genomes and transcriptomes.

Altenhoff AM, Levy J, Zarowiecki M, Tomiczek B, Warwick Vesztrocy A, Dalquen DA, Müller S, Telford MJ, Glover NM, Dylus D, Dessimoz C. Altenhoff AM, et al. Genome Res. 2019 Jul;29(7):1152-1163. doi: 10.1101/gr.243212.118. Epub 2019 Jun 24. Genome Res. 2019. PMID: 31235654 Free PMC article.

8

The OMA orthology database in 2018: retrieving evolutionary relationships among all domains of life through richer web and programmatic interfaces.

Altenhoff AM, Glover NM, Train CM, Kaleb K, Warwick Vesztrocy A, Dylus D, de Farias TM, Zile K, Stevenson C, Long J, Redestig H, Gonnet GH, Dessimoz C. Altenhoff AM, et al. Nucleic Acids Res. 2018 Jan 4;46(D1):D477-D485. doi: 10.1093/nar/gkx1019. Nucleic Acids Res. 2018. PMID: 29106550 Free PMC article.

9

RecPhyloXML: a format for reconciled gene trees.

Duchemin W, Gence G, Arigon Chifolleau AM, Arvestad L, Bansal MS, Berry V, Boussau B, Chevenet F, Comte N, Davín AA, Dessimoz C, Dylus D, Hasic D, Mallo D, Planel R, Posada D, Scornavacca C, Szöllosi G, Zhang L, Tannier É, Daubin V. Duchemin W, et al. Bioinformatics. 2018 Nov 1;34(21):3646-3652. doi: 10.1093/bioinformatics/bty389. Bioinformatics. 2018. PMID: 29762653 Free PMC article.

10

New genome assembly of the barn owl (Tyto alba alba).

Ducrest AL, Neuenschwander S, Schmid-Siegert E, Pagni M, Train C, Dylus D, Nevers Y, Warwick Vesztrocy A, San-Jose LM, Dupasquier M, Dessimoz C, Xenarios I, Roulin A, Goudet J. Ducrest AL, et al. Ecol Evol. 2020 Feb 19;10(5):2284-2298. doi: 10.1002/ece3.5991. eCollection 2020 Mar. Ecol Evol. 2020. PMID: 32184981 Free PMC article.

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