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DNAp: A Pipeline for DNA-seq Data Analysis.
Causey JL, Ashby C, Walker K, Wang ZP, Yang M, Guan Y, Moore JH, Huang X. Causey JL, et al. Among authors: huang x. Sci Rep. 2018 May 1;8(1):6793. doi: 10.1038/s41598-018-25022-6. Sci Rep. 2018. PMID: 29717215 Free PMC article.
No-boundary thinking in bioinformatics research.
Huang X, Bruce B, Buchan A, Congdon CB, Cramer CL, Jennings SF, Jiang H, Li Z, McClure G, McMullen R, Moore JH, Nanduri B, Peckham J, Perkins A, Polson SW, Rekepalli B, Salem S, Specker J, Wunsch D, Xiong D, Zhang S, Zhao Z. Huang X, et al. BioData Min. 2013 Nov 6;6(1):19. doi: 10.1186/1756-0381-6-19. BioData Min. 2013. PMID: 24192339 Free PMC article.
TERPRED: A Dynamic Structural Data Analysis Tool.
Walker K, Cramer CL, Jennings SF, Huang X. Walker K, et al. Among authors: huang x. Proc WRI World Congr Comput Sci Inf Eng. 2012 Jan 24;125:781-786. doi: 10.1007/978-3-642-25789-6_106. Proc WRI World Congr Comput Sci Inf Eng. 2012. PMID: 25302339 Free PMC article.
eMBI: Boosting Gene Expression-based Clustering for Cancer Subtypes.
Chang Z, Wang Z, Ashby C, Zhou C, Li G, Zhang S, Huang X. Chang Z, et al. Among authors: huang x. Cancer Inform. 2014 Oct 21;13(Suppl 2):105-12. doi: 10.4137/CIN.S13777. eCollection 2014. Cancer Inform. 2014. PMID: 25374455 Free PMC article.
Big data - a 21st century science Maginot Line? No-boundary thinking: shifting from the big data paradigm.
Huang X, Jennings SF, Bruce B, Buchan A, Cai L, Chen P, Cramer CL, Guan W, Hilgert UK, Jiang H, Li Z, McClure G, McMullen DF, Nanduri B, Perkins A, Rekepalli B, Salem S, Specker J, Walker K, Wunsch D, Xiong D, Zhang S, Zhang Y, Zhao Z, Moore JH. Huang X, et al. BioData Min. 2015 Feb 6;8:7. doi: 10.1186/s13040-015-0037-5. eCollection 2015. BioData Min. 2015. PMID: 25670967 Free PMC article.
BinPacker: Packing-Based De Novo Transcriptome Assembly from RNA-seq Data.
Liu J, Li G, Chang Z, Yu T, Liu B, McMullen R, Chen P, Huang X. Liu J, et al. Among authors: huang x. PLoS Comput Biol. 2016 Feb 19;12(2):e1004772. doi: 10.1371/journal.pcbi.1004772. eCollection 2016 Feb. PLoS Comput Biol. 2016. PMID: 26894997 Free PMC article.
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