Shields DC - Search Results

1

Integrating biomarkers across omic platforms: an approach to improve stratification of patients with indolent and aggressive prostate cancer.

Murphy K, Murphy BT, Boyce S, Flynn L, Gilgunn S, O'Rourke CJ, Rooney C, Stöckmann H, Walsh AL, Finn S, O'Kennedy RJ, O'Leary J, Pennington SR, Perry AS, Rudd PM, Saldova R, Sheils O, Shields DC, Watson RW. Murphy K, et al. Among authors: shields dc. Mol Oncol. 2018 Sep;12(9):1513-1525. doi: 10.1002/1878-0261.12348. Epub 2018 Aug 7. Mol Oncol. 2018. PMID: 29927052 Free PMC article.

2

Genetic variants in PPARGC1B and CNTN4 are associated with thromboxane A₂ formation and with cardiovascular event free survival in the Anglo-Scandinavian Cardiac Outcomes Trial (ASCOT).

McCarthy NS, Vangjeli C, Surendran P, Treumann A, Rooney C, Ho E, Sever P, Thom S, Hughes AD, Munroe PB, Howard P, Johnson T, Caulfield M, Shields DC, O'Brien E, Fitzgerald DJ, Stanton AV. McCarthy NS, et al. Among authors: shields dc. Atherosclerosis. 2018 Feb;269:42-49. doi: 10.1016/j.atherosclerosis.2017.12.013. Epub 2017 Dec 8. Atherosclerosis. 2018. PMID: 29258006 Free PMC article.

3

Evaluation of whether accelerated protein evolution in chordates has occurred before, after, or simultaneously with gene duplication.

Johnston CR, O'Dushlaine C, Fitzpatrick DA, Edwards RJ, Shields DC. Johnston CR, et al. Among authors: shields dc. Mol Biol Evol. 2007 Jan;24(1):315-23. doi: 10.1093/molbev/msl162. Epub 2006 Oct 25. Mol Biol Evol. 2007. PMID: 17065596

4

Correlation of disorder between S. cerevisiae interacting proteins.

Rue-Albrecht K, Shields DC, Khaldi N. Rue-Albrecht K, et al. Among authors: shields dc. Mol Biosyst. 2012 Jan;8(1):417-25. doi: 10.1039/c1mb05214d. Epub 2011 Nov 23. Mol Biosyst. 2012. PMID: 22108582

5

Computational approaches to developing short cyclic peptide modulators of protein-protein interactions.

Duffy FJ, Devocelle M, Shields DC. Duffy FJ, et al. Among authors: shields dc. Methods Mol Biol. 2015;1268:241-71. doi: 10.1007/978-1-4939-2285-7_11. Methods Mol Biol. 2015. PMID: 25555728

6

Computational Opportunities and Challenges in Finding Cyclic Peptide Modulators of Protein-Protein Interactions.

Duffy F, Maheshwari N, Buchete NV, Shields D. Duffy F, et al. Methods Mol Biol. 2019;2001:73-95. doi: 10.1007/978-1-4939-9504-2_5. Methods Mol Biol. 2019. PMID: 31134568 Review.

7

Switches in species-specific codon preferences: the influence of mutation biases.

Shields DC. Shields DC. J Mol Evol. 1990 Aug;31(2):71-80. doi: 10.1007/BF02109476. J Mol Evol. 1990. PMID: 2120452 Review.

8

Evidence that mutation patterns vary among Drosophila transposable elements.

Shields DC, Sharp PM. Shields DC, et al. J Mol Biol. 1989 Jun 20;207(4):843-6. doi: 10.1016/0022-2836(89)90252-0. J Mol Biol. 1989. PMID: 2547975

9

Significantly different patterns of amino acid replacement after gene duplication as compared to after speciation.

Seoighe C, Johnston CR, Shields DC. Seoighe C, et al. Among authors: shields dc. Mol Biol Evol. 2003 Apr;20(4):484-90. doi: 10.1093/molbev/msg059. Epub 2003 Mar 5. Mol Biol Evol. 2003. PMID: 12654935

10

Prediction of short linear protein binding regions.

Mooney C, Pollastri G, Shields DC, Haslam NJ. Mooney C, et al. Among authors: shields dc. J Mol Biol. 2012 Jan 6;415(1):193-204. doi: 10.1016/j.jmb.2011.10.025. Epub 2011 Oct 21. J Mol Biol. 2012. PMID: 22079048

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