Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

Search Results

14 results

Filters applied: . Clear all
Results are displayed in a computed author sort order. The Results By Year timeline is not available.
Page 1
A common open representation of mass spectrometry data and its application to proteomics research.
Pedrioli PG, Eng JK, Hubley R, Vogelzang M, Deutsch EW, Raught B, Pratt B, Nilsson E, Angeletti RH, Apweiler R, Cheung K, Costello CE, Hermjakob H, Huang S, Julian RK, Kapp E, McComb ME, Oliver SG, Omenn G, Paton NW, Simpson R, Smith R, Taylor CF, Zhu W, Aebersold R. Pedrioli PG, et al. Nat Biotechnol. 2004 Nov;22(11):1459-66. doi: 10.1038/nbt1031. Nat Biotechnol. 2004. PMID: 15529173
A cross-platform toolkit for mass spectrometry and proteomics.
Chambers MC, Maclean B, Burke R, Amodei D, Ruderman DL, Neumann S, Gatto L, Fischer B, Pratt B, Egertson J, Hoff K, Kessner D, Tasman N, Shulman N, Frewen B, Baker TA, Brusniak MY, Paulse C, Creasy D, Flashner L, Kani K, Moulding C, Seymour SL, Nuwaysir LM, Lefebvre B, Kuhlmann F, Roark J, Rainer P, Detlev S, Hemenway T, Huhmer A, Langridge J, Connolly B, Chadick T, Holly K, Eckels J, Deutsch EW, Moritz RL, Katz JE, Agus DB, MacCoss M, Tabb DL, Mallick P. Chambers MC, et al. Nat Biotechnol. 2012 Oct;30(10):918-20. doi: 10.1038/nbt.2377. Nat Biotechnol. 2012. PMID: 23051804 Free PMC article.
Skyline for Small Molecules: A Unifying Software Package for Quantitative Metabolomics.
Adams KJ, Pratt B, Bose N, Dubois LG, St John-Williams L, Perrott KM, Ky K, Kapahi P, Sharma V, MacCoss MJ, Moseley MA, Colton CA, MacLean BX, Schilling B, Thompson JW; Alzheimer’s Disease Metabolomics Consortium. Adams KJ, et al. J Proteome Res. 2020 Apr 3;19(4):1447-1458. doi: 10.1021/acs.jproteome.9b00640. Epub 2020 Mar 26. J Proteome Res. 2020. PMID: 31984744 Free PMC article.
LipidCreator workbench to probe the lipidomic landscape.
Peng B, Kopczynski D, Pratt BS, Ejsing CS, Burla B, Hermansson M, Benke PI, Tan SH, Chan MY, Torta F, Schwudke D, Meckelmann SW, Coman C, Schmitz OJ, MacLean B, Manke MC, Borst O, Wenk MR, Hoffmann N, Ahrends R. Peng B, et al. Among authors: pratt bs. Nat Commun. 2020 Apr 28;11(1):2057. doi: 10.1038/s41467-020-15960-z. Nat Commun. 2020. PMID: 32345972 Free PMC article.
Audit logs to enforce document integrity in Skyline and Panorama.
Rohde T, Chupalov R, Shulman N, Sharma V, Eckels J, Pratt BS, MacCoss MJ, MacLean BX. Rohde T, et al. Among authors: pratt bs. Bioinformatics. 2020 Aug 1;36(15):4366-4368. doi: 10.1093/bioinformatics/btaa547. Bioinformatics. 2020. PMID: 32467974 Free PMC article.
Development and Application of Multidimensional Lipid Libraries to Investigate Lipidomic Dysregulation Related to Smoke Inhalation Injury Severity.
Kirkwood KI, Christopher MW, Burgess JL, Littau SR, Foster K, Richey K, Pratt BS, Shulman N, Tamura K, MacCoss MJ, MacLean BX, Baker ES. Kirkwood KI, et al. Among authors: pratt bs. J Proteome Res. 2022 Jan 7;21(1):232-242. doi: 10.1021/acs.jproteome.1c00820. Epub 2021 Dec 7. J Proteome Res. 2022. PMID: 34874736 Free PMC article.
METLIN-CCS: an ion mobility spectrometry collision cross section database.
Baker ES, Hoang C, Uritboonthai W, Heyman HM, Pratt B, MacCoss M, MacLean B, Plumb R, Aisporna A, Siuzdak G. Baker ES, et al. Nat Methods. 2023 Dec;20(12):1836-1837. doi: 10.1038/s41592-023-02078-5. Nat Methods. 2023. PMID: 37932399 Free PMC article. No abstract available.
14 results