Ogata H - Search Results

1

Correction: Locality and diel cycling of viral production revealed by a 24 h time course cross-omics analysis in a coastal region of Japan.

Yoshida T, Nishimura Y, Watai H, Haruki N, Morimoto D, Kaneko H, Honda T, Yamamoto K, Hingamp P, Sako Y, Goto S, Ogata H. Yoshida T, et al. Among authors: ogata h. ISME J. 2018 Dec;12(12):3046. doi: 10.1038/s41396-018-0247-1. ISME J. 2018. PMID: 30068936 Free PMC article.

2

Organizing and computing metabolic pathway data in terms of binary relations.

Goto S, Bono H, Ogata H, Fujibuchi W, Nishioka T, Sato K, Kanehisa M. Goto S, et al. Among authors: ogata h. Pac Symp Biocomput. 1997:175-86. Pac Symp Biocomput. 1997. PMID: 9390290 Free article.

3

Reconstruction of amino acid biosynthesis pathways from the complete genome sequence.

Bono H, Ogata H, Goto S, Kanehisa M. Bono H, et al. Among authors: ogata h. Genome Res. 1998 Mar;8(3):203-10. doi: 10.1101/gr.8.3.203. Genome Res. 1998. PMID: 9521924 Free article. Review.

4

Computation with the KEGG pathway database.

Ogata H, Goto S, Fujibuchi W, Kanehisa M. Ogata H, et al. Biosystems. 1998 Jun-Jul;47(1-2):119-28. doi: 10.1016/s0303-2647(98)00017-3. Biosystems. 1998. PMID: 9715755

5

KEGG: Kyoto Encyclopedia of Genes and Genomes.

Ogata H, Goto S, Sato K, Fujibuchi W, Bono H, Kanehisa M. Ogata H, et al. Nucleic Acids Res. 1999 Jan 1;27(1):29-34. doi: 10.1093/nar/27.1.29. Nucleic Acids Res. 1999. PMID: 9847135 Free PMC article.

6

A heuristic graph comparison algorithm and its application to detect functionally related enzyme clusters.

Ogata H, Fujibuchi W, Goto S, Kanehisa M. Ogata H, et al. Nucleic Acids Res. 2000 Oct 15;28(20):4021-8. doi: 10.1093/nar/28.20.4021. Nucleic Acids Res. 2000. PMID: 11024183 Free PMC article.

7

Mimivirus reveals Mre11/Rad50 fusion proteins with a sporadic distribution in eukaryotes, bacteria, viruses and plasmids.

Yoshida T, Claverie JM, Ogata H. Yoshida T, et al. Among authors: ogata h. Virol J. 2011 Sep 7;8:427. doi: 10.1186/1743-422X-8-427. Virol J. 2011. PMID: 21899737 Free PMC article.

8

Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes.

Hingamp P, Grimsley N, Acinas SG, Clerissi C, Subirana L, Poulain J, Ferrera I, Sarmento H, Villar E, Lima-Mendez G, Faust K, Sunagawa S, Claverie JM, Moreau H, Desdevises Y, Bork P, Raes J, de Vargas C, Karsenti E, Kandels-Lewis S, Jaillon O, Not F, Pesant S, Wincker P, Ogata H. Hingamp P, et al. Among authors: ogata h. ISME J. 2013 Sep;7(9):1678-95. doi: 10.1038/ismej.2013.59. Epub 2013 Apr 11. ISME J. 2013. PMID: 23575371 Free PMC article.

9

Unveiling of the diversity of Prasinoviruses (Phycodnaviridae) in marine samples by using high-throughput sequencing analyses of PCR-amplified DNA polymerase and major capsid protein genes.

Clerissi C, Grimsley N, Ogata H, Hingamp P, Poulain J, Desdevises Y. Clerissi C, et al. Among authors: ogata h. Appl Environ Microbiol. 2014 May;80(10):3150-60. doi: 10.1128/AEM.00123-14. Epub 2014 Mar 14. Appl Environ Microbiol. 2014. PMID: 24632251 Free PMC article.

10

Reverse transcriptase genes are highly abundant and transcriptionally active in marine plankton assemblages.

Lescot M, Hingamp P, Kojima KK, Villar E, Romac S, Veluchamy A, Boccara M, Jaillon O, Iudicone D, Bowler C, Wincker P, Claverie JM, Ogata H. Lescot M, et al. Among authors: ogata h. ISME J. 2016 May;10(5):1134-46. doi: 10.1038/ismej.2015.192. Epub 2015 Nov 27. ISME J. 2016. PMID: 26613339 Free PMC article.

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