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Detecting repeated cancer evolution from multi-region tumor sequencing data.
Caravagna G, Giarratano Y, Ramazzotti D, Tomlinson I, Graham TA, Sanguinetti G, Sottoriva A. Caravagna G, et al. Among authors: giarratano y. Nat Methods. 2018 Sep;15(9):707-714. doi: 10.1038/s41592-018-0108-x. Epub 2018 Aug 31. Nat Methods. 2018. PMID: 30171232 Free PMC article.
Phylogenetic convolutional neural networks in metagenomics.
Fioravanti D, Giarratano Y, Maggio V, Agostinelli C, Chierici M, Jurman G, Furlanello C. Fioravanti D, et al. Among authors: giarratano y. BMC Bioinformatics. 2018 Mar 8;19(Suppl 2):49. doi: 10.1186/s12859-018-2033-5. BMC Bioinformatics. 2018. PMID: 29536822 Free PMC article.
Loss of the heterogeneous expression of flippase ATP11B leads to cerebral small vessel disease in a normotensive rat model.
Quick S, Procter TV, Moss J, Seeker L, Walton M, Lawson A, Baker S, Beletski A, Garcia DJ, Mohammad M, Mungall W, Onishi A, Tobola Z, Stringer M, Jansen MA, Vallatos A, Giarratano Y, Bernabeu MO, Wardlaw JM, Williams A. Quick S, et al. Among authors: giarratano y. Acta Neuropathol. 2022 Aug;144(2):283-303. doi: 10.1007/s00401-022-02441-4. Epub 2022 May 30. Acta Neuropathol. 2022. PMID: 35635573 Free PMC article.
Competition for endothelial cell polarity drives vascular morphogenesis in the mouse retina.
Barbacena P, Dominguez-Cejudo M, Fonseca CG, Gómez-González M, Faure LM, Zarkada G, Pena A, Pezzarossa A, Ramalho D, Giarratano Y, Ouarné M, Barata D, Fortunato IC, Misikova LH, Mauldin I, Carvalho Y, Trepat X, Roca-Cusachs P, Eichmann A, Bernabeu MO, Franco CA. Barbacena P, et al. Among authors: giarratano y. Dev Cell. 2022 Oct 10;57(19):2321-2333.e9. doi: 10.1016/j.devcel.2022.09.002. Dev Cell. 2022. PMID: 36220082 Free PMC article.
Multi-modal retinal imaging for investigating neurovascular health.
Gibbon S, Hamid C, Threlfall A, Ritchie C, Dhillon B, Giarratano Y, Rashid D, Trucco E, MacGillivray TJ. Gibbon S, et al. Among authors: giarratano y. Eye (Lond). 2023 Nov 28. doi: 10.1038/s41433-023-02830-3. Online ahead of print. Eye (Lond). 2023. PMID: 38017100 No abstract available.