Alm EJ - Search Results

1

Analysis of 1135 gut metagenomes identifies sex-specific resistome profiles.

Sinha T, Vich Vila A, Garmaeva S, Jankipersadsing SA, Imhann F, Collij V, Bonder MJ, Jiang X, Gurry T, Alm EJ, D'Amato M, Weersma RK, Scherjon S, Wijmenga C, Fu J, Kurilshikov A, Zhernakova A. Sinha T, et al. Among authors: alm ej. Gut Microbes. 2019;10(3):358-366. doi: 10.1080/19490976.2018.1528822. Epub 2018 Oct 29. Gut Microbes. 2019. PMID: 30373468 Free PMC article.

2

Non-invasive mapping of the gastrointestinal microbiota identifies children with inflammatory bowel disease.

Papa E, Docktor M, Smillie C, Weber S, Preheim SP, Gevers D, Giannoukos G, Ciulla D, Tabbaa D, Ingram J, Schauer DB, Ward DV, Korzenik JR, Xavier RJ, Bousvaros A, Alm EJ. Papa E, et al. Among authors: alm ej. PLoS One. 2012;7(6):e39242. doi: 10.1371/journal.pone.0039242. Epub 2012 Jun 29. PLoS One. 2012. PMID: 22768065 Free PMC article.

3

Designing fecal microbiota transplant trials that account for differences in donor stool efficacy.

Olesen SW, Gurry T, Alm EJ. Olesen SW, et al. Among authors: alm ej. Stat Methods Med Res. 2018 Oct;27(10):2906-2917. doi: 10.1177/0962280216688502. Epub 2017 Feb 9. Stat Methods Med Res. 2018. PMID: 28178876 Free article.

4

Reply.

Bajaj JS, Kassam Z, Cox IJ, Gurry T, Williams R, Alm E, John B, Smith M, Taylor-Robinson SD, Gillevet PM. Bajaj JS, et al. Hepatology. 2017 Oct;66(4):1355-1356. doi: 10.1002/hep.29368. Epub 2017 Aug 26. Hepatology. 2017. PMID: 28714102 Free article. No abstract available.

5

Identifying predictive features of Clostridium difficile infection recurrence before, during, and after primary antibiotic treatment.

Pakpour S, Bhanvadia A, Zhu R, Amarnani A, Gibbons SM, Gurry T, Alm EJ, Martello LA. Pakpour S, et al. Among authors: alm ej. Microbiome. 2017 Nov 13;5(1):148. doi: 10.1186/s40168-017-0368-1. Microbiome. 2017. PMID: 29132405 Free PMC article.

6

Meta-analysis of gut microbiome studies identifies disease-specific and shared responses.

Duvallet C, Gibbons SM, Gurry T, Irizarry RA, Alm EJ. Duvallet C, et al. Among authors: alm ej. Nat Commun. 2017 Dec 5;8(1):1784. doi: 10.1038/s41467-017-01973-8. Nat Commun. 2017. PMID: 29209090 Free PMC article.

7

Endospores and other lysis-resistant bacteria comprise a widely shared core community within the human microbiota.

Kearney SM, Gibbons SM, Poyet M, Gurry T, Bullock K, Allegretti JR, Clish CB, Alm EJ. Kearney SM, et al. Among authors: alm ej. ISME J. 2018 Oct;12(10):2403-2416. doi: 10.1038/s41396-018-0192-z. Epub 2018 Jun 13. ISME J. 2018. PMID: 29899513 Free PMC article.

8

Predictability and persistence of prebiotic dietary supplementation in a healthy human cohort.

Gurry T; HST Microbiome Consortium*; Gibbons SM, Nguyen LTT, Kearney SM, Ananthakrishnan A, Jiang X, Duvallet C, Kassam Z, Alm EJ. Gurry T, et al. Among authors: alm ej. Sci Rep. 2018 Aug 23;8(1):12699. doi: 10.1038/s41598-018-30783-1. Sci Rep. 2018. PMID: 30139999 Free PMC article.

9

Gut microbiota composition and functional changes in inflammatory bowel disease and irritable bowel syndrome.

Vich Vila A, Imhann F, Collij V, Jankipersadsing SA, Gurry T, Mujagic Z, Kurilshikov A, Bonder MJ, Jiang X, Tigchelaar EF, Dekens J, Peters V, Voskuil MD, Visschedijk MC, van Dullemen HM, Keszthelyi D, Swertz MA, Franke L, Alberts R, Festen EAM, Dijkstra G, Masclee AAM, Hofker MH, Xavier RJ, Alm EJ, Fu J, Wijmenga C, Jonkers DMAE, Zhernakova A, Weersma RK. Vich Vila A, et al. Among authors: alm ej. Sci Transl Med. 2018 Dec 19;10(472):eaap8914. doi: 10.1126/scitranslmed.aap8914. Sci Transl Med. 2018. PMID: 30567928

10

Invertible promoters mediate bacterial phase variation, antibiotic resistance, and host adaptation in the gut.

Jiang X, Hall AB, Arthur TD, Plichta DR, Covington CT, Poyet M, Crothers J, Moses PL, Tolonen AC, Vlamakis H, Alm EJ, Xavier RJ. Jiang X, et al. Among authors: alm ej. Science. 2019 Jan 11;363(6423):181-187. doi: 10.1126/science.aau5238. Science. 2019. PMID: 30630933 Free PMC article.

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