Sedgewick AJ - Search Results

1

Data-Independent Acquisition Mass Spectrometry To Quantify Protein Levels in FFPE Tumor Biopsies for Molecular Diagnostics.

Kim YJ, Sweet SMM, Egertson JD, Sedgewick AJ, Woo S, Liao WL, Merrihew GE, Searle BC, Vaske C, Heaton R, MacCoss MJ, Hembrough T. Kim YJ, et al. Among authors: sedgewick aj. J Proteome Res. 2019 Jan 4;18(1):426-435. doi: 10.1021/acs.jproteome.8b00699. Epub 2018 Dec 12. J Proteome Res. 2019. PMID: 30481034 Free PMC article.

2

Large scale, robust, and accurate whole transcriptome profiling from clinical formalin-fixed paraffin-embedded samples.

Newton Y, Sedgewick AJ, Cisneros L, Golovato J, Johnson M, Szeto CW, Rabizadeh S, Sanborn JZ, Benz SC, Vaske C. Newton Y, et al. Among authors: sedgewick aj. Sci Rep. 2020 Oct 19;10(1):17597. doi: 10.1038/s41598-020-74483-1. Sci Rep. 2020. PMID: 33077815 Free PMC article.

3

Transcriptional Programming of Normal and Inflamed Human Epidermis at Single-Cell Resolution.

Cheng JB, Sedgewick AJ, Finnegan AI, Harirchian P, Lee J, Kwon S, Fassett MS, Golovato J, Gray M, Ghadially R, Liao W, Perez White BE, Mauro TM, Mully T, Kim EA, Sbitany H, Neuhaus IM, Grekin RC, Yu SS, Gray JW, Purdom E, Paus R, Vaske CJ, Benz SC, Song JS, Cho RJ. Cheng JB, et al. Among authors: sedgewick aj. Cell Rep. 2018 Oct 23;25(4):871-883. doi: 10.1016/j.celrep.2018.09.006. Cell Rep. 2018. PMID: 30355494 Free PMC article.

4

A20 and ABIN1 Suppression of a Keratinocyte Inflammatory Program with a Shared Single-Cell Expression Signature in Diverse Human Rashes.

Harirchian P, Lee J, Hilz S, Sedgewick AJ, Perez White BE, Kesling MJ, Mully T, Golovato J, Gray M, Mauro TM, Purdom E, Kim EA, Sbitany H, Bhutani T, Vaske CJ, Benz SC, Cho RJ, Cheng JB. Harirchian P, et al. Among authors: sedgewick aj. J Invest Dermatol. 2019 Jun;139(6):1264-1273. doi: 10.1016/j.jid.2018.10.046. Epub 2018 Dec 10. J Invest Dermatol. 2019. PMID: 30543901 Free PMC article.

5

Learning subgroup-specific regulatory interactions and regulator independence with PARADIGM.

Sedgewick AJ, Benz SC, Rabizadeh S, Soon-Shiong P, Vaske CJ. Sedgewick AJ, et al. Bioinformatics. 2013 Jul 1;29(13):i62-70. doi: 10.1093/bioinformatics/btt229. Bioinformatics. 2013. PMID: 23813010 Free PMC article.

6

A single-cell transcriptional gradient in human cutaneous memory T cells restricts Th17/Tc17 identity.

Cook CP, Taylor M, Liu Y, Schmidt R, Sedgewick A, Kim E, Hailer A, North JP, Harirchian P, Wang H, Kashem SW, Shou Y, McCalmont TC, Benz SC, Choi J, Purdom E, Marson A, Ramos SBV, Cheng JB, Cho RJ. Cook CP, et al. Cell Rep Med. 2022 Aug 16;3(8):100715. doi: 10.1016/j.xcrm.2022.100715. Cell Rep Med. 2022. PMID: 35977472 Free PMC article.

7

Single-Cell Profiling Reveals Divergent, Globally Patterned Immune Responses in Murine Skin Inflammation.

Liu Y, Cook C, Sedgewick AJ, Zhang S, Fassett MS, Ricardo-Gonzalez RR, Harirchian P, Kashem SW, Hanakawa S, Leistico JR, North JP, Taylor MA, Zhang W, Man MQ, Charruyer A, Beliakova-Bethell N, Benz SC, Ghadially R, Mauro TM, Kaplan DH, Kabashima K, Choi J, Song JS, Cho RJ, Cheng JB. Liu Y, et al. Among authors: sedgewick aj. iScience. 2020 Sep 19;23(10):101582. doi: 10.1016/j.isci.2020.101582. eCollection 2020 Oct 23. iScience. 2020. PMID: 33205009 Free PMC article.

8

Mixed graphical models for integrative causal analysis with application to chronic lung disease diagnosis and prognosis.

Sedgewick AJ, Buschur K, Shi I, Ramsey JD, Raghu VK, Manatakis DV, Zhang Y, Bon J, Chandra D, Karoleski C, Sciurba FC, Spirtes P, Glymour C, Benos PV. Sedgewick AJ, et al. Bioinformatics. 2019 Apr 1;35(7):1204-1212. doi: 10.1093/bioinformatics/bty769. Bioinformatics. 2019. PMID: 30192904 Free PMC article.

9

Learning mixed graphical models with separate sparsity parameters and stability-based model selection.

Sedgewick AJ, Shi I, Donovan RM, Benos PV. Sedgewick AJ, et al. BMC Bioinformatics. 2016 Jun 6;17 Suppl 5(Suppl 5):175. doi: 10.1186/s12859-016-1039-0. BMC Bioinformatics. 2016. PMID: 27294886 Free PMC article.

10

PARP1 rs1805407 Increases Sensitivity to PARP1 Inhibitors in Cancer Cells Suggesting an Improved Therapeutic Strategy.

Abecassis I, Sedgewick AJ, Romkes M, Buch S, Nukui T, Kapetanaki MG, Vogt A, Kirkwood JM, Benos PV, Tawbi H. Abecassis I, et al. Among authors: sedgewick aj. Sci Rep. 2019 Mar 1;9(1):3309. doi: 10.1038/s41598-019-39542-2. Sci Rep. 2019. PMID: 30824778 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

14 results

Search Page