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Deconvolution of single-cell multi-omics layers reveals regulatory heterogeneity.
Liu L, Liu C, Quintero A, Wu L, Yuan Y, Wang M, Cheng M, Leng L, Xu L, Dong G, Li R, Liu Y, Wei X, Xu J, Chen X, Lu H, Chen D, Wang Q, Zhou Q, Lin X, Li G, Liu S, Wang Q, Wang H, Fink JL, Gao Z, Liu X, Hou Y, Zhu S, Yang H, Ye Y, Lin G, Chen F, Herrmann C, Eils R, Shang Z, Xu X. Liu L, et al. Among authors: chen d, chen f, chen x. Nat Commun. 2019 Jan 28;10(1):470. doi: 10.1038/s41467-018-08205-7. Nat Commun. 2019. PMID: 30692544 Free PMC article.
Establishment of porcine and human expanded potential stem cells.
Gao X, Nowak-Imialek M, Chen X, Chen D, Herrmann D, Ruan D, Chen ACH, Eckersley-Maslin MA, Ahmad S, Lee YL, Kobayashi T, Ryan D, Zhong J, Zhu J, Wu J, Lan G, Petkov S, Yang J, Antunes L, Campos LS, Fu B, Wang S, Yong Y, Wang X, Xue SG, Ge L, Liu Z, Huang Y, Nie T, Li P, Wu D, Pei D, Zhang Y, Lu L, Yang F, Kimber SJ, Reik W, Zou X, Shang Z, Lai L, Surani A, Tam PPL, Ahmed A, Yeung WSB, Teichmann SA, Niemann H, Liu P. Gao X, et al. Among authors: chen ach, chen d, chen x. Nat Cell Biol. 2019 Jun;21(6):687-699. doi: 10.1038/s41556-019-0333-2. Epub 2019 Jun 3. Nat Cell Biol. 2019. PMID: 31160711 Free PMC article.
Single-cell brain atlas of Parkinson's disease mouse model.
Zhong J, Tang G, Zhu J, Wu W, Li G, Lin X, Liang L, Chai C, Zeng Y, Wang F, Luo L, Li J, Chen F, Huang Z, Zhang X, Zhang Y, Liu H, Qiu X, Tang S, Chen D. Zhong J, et al. Among authors: chen d, chen f. J Genet Genomics. 2021 Apr 20;48(4):277-288. doi: 10.1016/j.jgg.2021.01.003. Epub 2021 Feb 18. J Genet Genomics. 2021. PMID: 34052184 Free article.
The trans-omics landscape of COVID-19.
Wu P, Chen D, Ding W, Wu P, Hou H, Bai Y, Zhou Y, Li K, Xiang S, Liu P, Ju J, Guo E, Liu J, Yang B, Fan J, He L, Sun Z, Feng L, Wang J, Wu T, Wang H, Cheng J, Xing H, Meng Y, Li Y, Zhang Y, Luo H, Xie G, Lan X, Tao Y, Li J, Yuan H, Huang K, Sun W, Qian X, Li Z, Huang M, Ding P, Wang H, Qiu J, Wang F, Wang S, Zhu J, Ding X, Chai C, Liang L, Wang X, Luo L, Sun Y, Yang Y, Zhuang Z, Li T, Tian L, Zhang S, Zhu L, Chang A, Chen L, Wu Y, Ma X, Chen F, Ren Y, Xu X, Liu S, Wang J, Yang H, Wang L, Sun C, Ma D, Jin X, Chen G. Wu P, et al. Among authors: chen l, chen d, chen f, chen g. Nat Commun. 2021 Jul 27;12(1):4543. doi: 10.1038/s41467-021-24482-1. Nat Commun. 2021. PMID: 34315889 Free PMC article.
Single cell atlas for 11 non-model mammals, reptiles and birds.
Chen D, Sun J, Zhu J, Ding X, Lan T, Wang X, Wu W, Ou Z, Zhu L, Ding P, Wang H, Luo L, Xiang R, Wang X, Qiu J, Wang S, Li H, Chai C, Liang L, An F, Zhang L, Han L, Zhu Y, Wang F, Yuan Y, Wu W, Sun C, Lu H, Wu J, Sun X, Zhang S, Sahu SK, Liu P, Xia J, Zhang L, Chen H, Fang D, Zeng Y, Wu Y, Cui Z, He Q, Jiang S, Ma X, Feng W, Xu Y, Li F, Liu Z, Chen L, Chen F, Jin X, Qiu W, Wang T, Li Y, Xing X, Yang H, Xu Y, Hua Y, Liu Y, Liu H, Xu X. Chen D, et al. Among authors: chen l, chen f, chen h. Nat Commun. 2021 Dec 6;12(1):7083. doi: 10.1038/s41467-021-27162-2. Nat Commun. 2021. PMID: 34873160 Free PMC article.
CDCP: a visualization and analyzing platform for single-cell datasets.
Li Y, Yang T, Lai T, You L, Yang F, Qiu J, Wang L, Du W, Hua C, Xu Z, Cai J, Li Z, Liu Y, Li L, Zhang M, Chen J, Zhang L, Chen D, Wang W, Liu S, Wu L, Zeng W, Wang B, Wei X, Liu L, Chen F. Li Y, et al. Among authors: chen j, chen d, chen f. J Genet Genomics. 2022 Jul;49(7):689-692. doi: 10.1016/j.jgg.2021.12.004. Epub 2021 Dec 29. J Genet Genomics. 2022. PMID: 34973426 No abstract available.
Clinical and translational values of spatial transcriptomics.
Zhang L, Chen D, Song D, Liu X, Zhang Y, Xu X, Wang X. Zhang L, et al. Among authors: chen d. Signal Transduct Target Ther. 2022 Apr 1;7(1):111. doi: 10.1038/s41392-022-00960-w. Signal Transduct Target Ther. 2022. PMID: 35365599 Free PMC article. Review.
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