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The first chromosome-level genome for a marine mammal as a resource to study ecology and evolution.
Fan G, Zhang Y, Liu X, Wang J, Sun Z, Sun S, Zhang H, Chen J, Lv M, Han K, Tan X, Hu J, Guan R, Fu Y, Liu S, Chen X, Xu Q, Qin Y, Liu L, Bai J, Wang O, Tang J, Lu H, Shang Z, Wang B, Hu G, Zhao X, Zou Y, Chen A, Gong M, Zhang W, Lee SM, Li S, Liu J, Li Z, Lu Y, Sabir JSM, Sabir MJ, Khan M, Hajrah NH, Yin Y, Kristiansen K, Yang H, Wang J, Xu X, Liu X. Fan G, et al. Among authors: li s, li z. Mol Ecol Resour. 2019 Jul;19(4):944-956. doi: 10.1111/1755-0998.13003. Epub 2019 May 9. Mol Ecol Resour. 2019. PMID: 30735609
An Indo-Pacific Humpback Dolphin Genome Reveals Insights into Chromosome Evolution and the Demography of a Vulnerable Species.
Zhang P, Zhao Y, Li C, Lin M, Dong L, Zhang R, Liu M, Li K, Zhang H, Liu X, Zhang Y, Yuan Y, Liu H, Seim I, Sun S, Du X, Chang Y, Li F, Liu S, Lee SM, Wang K, Wang D, Wang X, McGowen MR, Jefferson TA, Olsen MT, Stiller J, Zhang G, Xu X, Yang H, Fan G, Liu X, Li S. Zhang P, et al. Among authors: li f, li c, li s, li k. iScience. 2020 Oct 3;23(10):101640. doi: 10.1016/j.isci.2020.101640. eCollection 2020 Oct 23. iScience. 2020. PMID: 33103078 Free PMC article.
Runs of homozygosity in killer whale genomes provide a global record of demographic histories.
Foote AD, Hooper R, Alexander A, Baird RW, Baker CS, Ballance L, Barlow J, Brownlow A, Collins T, Constantine R, Dalla Rosa L, Davison NJ, Durban JW, Esteban R, Excoffier L, Martin SLF, Forney KA, Gerrodette T, Gilbert MTP, Guinet C, Hanson MB, Li S, Martin MD, Robertson KM, Samarra FIP, de Stephanis R, Tavares SB, Tixier P, Totterdell JA, Wade P, Wolf JBW, Fan G, Zhang Y, Morin PA. Foote AD, et al. Among authors: li s. Mol Ecol. 2021 Dec;30(23):6162-6177. doi: 10.1111/mec.16137. Epub 2021 Sep 2. Mol Ecol. 2021. PMID: 34416064 Free article.
Comparative genomics provides insights into the aquatic adaptations of mammals.
Yuan Y, Zhang Y, Zhang P, Liu C, Wang J, Gao H, Hoelzel AR, Seim I, Lv M, Lin M, Dong L, Gao H, Yang Z, Caruso F, Lin W, da Fonseca RR, Wang D, Wang X, Rasmussen MH, Liu M, Zheng J, Zhao L, Campos PF, Kang H, Iversen M, Song Y, Guo X, Guo J, Qin Y, Pan S, Xu Q, Meng L, A Y, Liu S, Lee SM, Liu X, Xu X, Yang H, Fan G, Wang K, Li S. Yuan Y, et al. Among authors: li s. Proc Natl Acad Sci U S A. 2021 Sep 14;118(37):e2106080118. doi: 10.1073/pnas.2106080118. Proc Natl Acad Sci U S A. 2021. PMID: 34503999 Free PMC article.
Inbreeding depression explains killer whale population dynamics.
Kardos M, Zhang Y, Parsons KM, A Y, Kang H, Xu X, Liu X, Matkin CO, Zhang P, Ward EJ, Hanson MB, Emmons C, Ford MJ, Fan G, Li S. Kardos M, et al. Among authors: li s. Nat Ecol Evol. 2023 May;7(5):675-686. doi: 10.1038/s41559-023-01995-0. Epub 2023 Mar 20. Nat Ecol Evol. 2023. PMID: 36941343
Genomics of post-bottleneck recovery in the northern elephant seal.
Hoelzel AR, Gkafas GA, Kang H, Sarigol F, Le Boeuf B, Costa DP, Beltran RS, Reiter J, Robinson PW, McInerney N, Seim I, Sun S, Fan G, Li S. Hoelzel AR, et al. Among authors: li s. Nat Ecol Evol. 2024 Apr;8(4):686-694. doi: 10.1038/s41559-024-02337-4. Epub 2024 Feb 21. Nat Ecol Evol. 2024. PMID: 38383849 Free PMC article.
Humpback dolphins at risk of extinction.
Li S. Li S. Science. 2020 Mar 20;367(6484):1313-1314. doi: 10.1126/science.abb5744. Science. 2020. PMID: 32193315 No abstract available.
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