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Clonal replacement and heterogeneity in breast tumors treated with neoadjuvant HER2-targeted therapy.
Nat Commun. 2019 Feb 8;10(1):657. doi: 10.1038/s41467-019-08593-4.
Nat Commun. 2019.
PMID: 30737380
Free PMC article.
Publisher Correction: Clonal replacement and heterogeneity in breast tumors treated with neoadjuvant HER2-targeted therapy.
Caswell-Jin JL, McNamara K, Reiter JG, Sun R, Hu Z, Ma Z, Ding J, Suarez CJ, Tilk S, Raghavendra A, Forte V, Chin SF, Bardwell H, Provenzano E, Caldas C, Lang J, West R, Tripathy D, Press MF, Curtis C.
Caswell-Jin JL, et al. Among authors: tilk s.
Nat Commun. 2019 May 30;10(1):2433. doi: 10.1038/s41467-019-10456-x.
Nat Commun. 2019.
PMID: 31147552
Free PMC article.
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Most cancers carry a substantial deleterious load due to Hill-Robertson interference.
Tilk S, Tkachenko S, Curtis C, Petrov DA, McFarland CD.
Tilk S, et al.
Elife. 2022 Sep 1;11:e67790. doi: 10.7554/eLife.67790.
Elife. 2022.
PMID: 36047771
Free PMC article.
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Broad geographic sampling reveals the shared basis and environmental correlates of seasonal adaptation in Drosophila.
Machado HE, Bergland AO, Taylor R, Tilk S, Behrman E, Dyer K, Fabian DK, Flatt T, González J, Karasov TL, Kim B, Kozeretska I, Lazzaro BP, Merritt TJ, Pool JE, O'Brien K, Rajpurohit S, Roy PR, Schaeffer SW, Serga S, Schmidt P, Petrov DA.
Machado HE, et al. Among authors: tilk s.
Elife. 2021 Jun 22;10:e67577. doi: 10.7554/eLife.67577.
Elife. 2021.
PMID: 34155971
Free PMC article.
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Direct observation of adaptive tracking on ecological time scales in Drosophila.
Rudman SM, Greenblum SI, Rajpurohit S, Betancourt NJ, Hanna J, Tilk S, Yokoyama T, Petrov DA, Schmidt P.
Rudman SM, et al. Among authors: tilk s.
Science. 2022 Mar 18;375(6586):eabj7484. doi: 10.1126/science.abj7484. Epub 2022 Mar 18.
Science. 2022.
PMID: 35298245
Free PMC article.
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Accurate Allele Frequencies from Ultra-low Coverage Pool-Seq Samples in Evolve-and-Resequence Experiments.
Tilk S, Bergland A, Goodman A, Schmidt P, Petrov D, Greenblum S.
Tilk S, et al.
G3 (Bethesda). 2019 Dec 3;9(12):4159-4168. doi: 10.1534/g3.119.400755.
G3 (Bethesda). 2019.
PMID: 31636085
Free PMC article.
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Deep sequencing of natural and experimental populations of Drosophila melanogaster reveals biases in the spectrum of new mutations.
Assaf ZJ, Tilk S, Park J, Siegal ML, Petrov DA.
Assaf ZJ, et al. Among authors: tilk s.
Genome Res. 2017 Dec;27(12):1988-2000. doi: 10.1101/gr.219956.116. Epub 2017 Oct 27.
Genome Res. 2017.
PMID: 29079675
Free PMC article.
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Accurate, ultra-low coverage genome reconstruction and association studies in Hybrid Swarm mapping populations.
Weller CA, Tilk S, Rajpurohit S, Bergland AO.
Weller CA, et al. Among authors: tilk s.
G3 (Bethesda). 2021 Apr 15;11(4):jkab062. doi: 10.1093/g3journal/jkab062.
G3 (Bethesda). 2021.
PMID: 33677482
Free PMC article.
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