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Unexpected implications of STAT3 acetylation revealed by genetic encoding of acetyl-lysine.
Biochim Biophys Acta Gen Subj. 2019 Sep;1863(9):1343-1350. doi: 10.1016/j.bbagen.2019.05.019. Epub 2019 Jun 3.
Biochim Biophys Acta Gen Subj. 2019.
PMID: 31170499
Free PMC article.
QBiC-Pred: quantitative predictions of transcription factor binding changes due to sequence variants.
Martin V, Zhao J, Afek A, Mielko Z, Gordân R.
Martin V, et al. Among authors: mielko z.
Nucleic Acids Res. 2019 Jul 2;47(W1):W127-W135. doi: 10.1093/nar/gkz363.
Nucleic Acids Res. 2019.
PMID: 31114870
Free PMC article.
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DNA mismatches reveal conformational penalties in protein-DNA recognition.
Afek A, Shi H, Rangadurai A, Sahay H, Senitzki A, Xhani S, Fang M, Salinas R, Mielko Z, Pufall MA, Poon GMK, Haran TE, Schumacher MA, Al-Hashimi HM, Gordân R.
Afek A, et al. Among authors: mielko z.
Nature. 2020 Nov;587(7833):291-296. doi: 10.1038/s41586-020-2843-2. Epub 2020 Oct 21.
Nature. 2020.
PMID: 33087930
Free PMC article.
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cnd-1/NeuroD1 Functions with the Homeobox Gene ceh-5/Vax2 and Hox Gene ceh-13/labial To Specify Aspects of RME and DD Neuron Fate in Caenorhabditis elegans.
Aquino-Nunez W, Mielko ZE, Dunn T, Santorella EM, Hosea C, Leitner L, McCalla D, Simms C, Verola WM, Vijaykumar S, Hudson ML.
Aquino-Nunez W, et al. Among authors: mielko ze.
G3 (Bethesda). 2020 Sep 2;10(9):3071-3085. doi: 10.1534/g3.120.401515.
G3 (Bethesda). 2020.
PMID: 32601060
Free PMC article.
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ngn-1/neurogenin Activates Transcription of Multiple Terminal Selector Transcription Factors in the Caenorhabditis elegans Nervous System.
Christensen EL, Beasley A, Radchuk J, Mielko ZE, Preston E, Stuckett S, Murray JI, Hudson ML.
Christensen EL, et al. Among authors: mielko ze.
G3 (Bethesda). 2020 Jun 1;10(6):1949-1962. doi: 10.1534/g3.120.401126.
G3 (Bethesda). 2020.
PMID: 32273286
Free PMC article.
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UV irradiation remodels the specificity landscape of transcription factors.
Mielko Z, Zhang Y, Sahay H, Liu Y, Schaich MA, Schnable B, Morrison AM, Burdinski D, Adar S, Pufall M, Van Houten B, Gordân R, Afek A.
Mielko Z, et al.
Proc Natl Acad Sci U S A. 2023 Mar 14;120(11):e2217422120. doi: 10.1073/pnas.2217422120. Epub 2023 Mar 8.
Proc Natl Acad Sci U S A. 2023.
PMID: 36888663
Free PMC article.
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