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Comparison of quantitative trait loci methods: Total expression and allelic imbalance method in brain RNA-seq.
Gådin JR, Buil A, Colantuoni C, Jaffe AE, Nielsen J, Shin JH, Hyde TM, Kleinman JE; BrainSeq Consortium; Plath N, Eriksson P, Brunak S, Didriksen M, Weinberger DR, Folkersen L. Gådin JR, et al. Among authors: brunak s. PLoS One. 2019 Jun 17;14(6):e0217765. doi: 10.1371/journal.pone.0217765. eCollection 2019. PLoS One. 2019. PMID: 31206532 Free PMC article.
Mapping of 79 loci for 83 plasma protein biomarkers in cardiovascular disease.
Folkersen L, Fauman E, Sabater-Lleal M, Strawbridge RJ, Frånberg M, Sennblad B, Baldassarre D, Veglia F, Humphries SE, Rauramaa R, de Faire U, Smit AJ, Giral P, Kurl S, Mannarino E, Enroth S, Johansson Å, Enroth SB, Gustafsson S, Lind L, Lindgren C, Morris AP, Giedraitis V, Silveira A, Franco-Cereceda A, Tremoli E; IMPROVE study group; Gyllensten U, Ingelsson E, Brunak S, Eriksson P, Ziemek D, Hamsten A, Mälarstig A. Folkersen L, et al. Among authors: brunak s. PLoS Genet. 2017 Apr 3;13(4):e1006706. doi: 10.1371/journal.pgen.1006706. eCollection 2017 Apr. PLoS Genet. 2017. PMID: 28369058 Free PMC article.
Integration of known DNA, RNA and protein biomarkers provides prediction of anti-TNF response in rheumatoid arthritis: results from the COMBINE study.
Folkersen L, Brynedal B, Diaz-Gallo LM, Ramsköld D, Shchetynsky K, Westerlind H, Sundström Y, Schepis D, Hensvold A, Vivar N, Eloranta ML, Rönnblom L, Brunak S, Malmström V, Catrina A, Moerch UG, Klareskog L, Padyukov L, Berg L. Folkersen L, et al. Among authors: brunak s. Mol Med. 2016 Sep;22:322-328. doi: 10.2119/molmed.2016.00078. Epub 2016 Aug 15. Mol Med. 2016. PMID: 27532898 Free PMC article.
O-GLYCBASE: a revised database of O-glycosylated proteins.
Hansen JE, Lund O, Nielsen JO, Hansen JE, Brunak S. Hansen JE, et al. Among authors: brunak s. Nucleic Acids Res. 1996 Jan 1;24(1):248-52. doi: 10.1093/nar/24.1.248. Nucleic Acids Res. 1996. PMID: 8594592 Free PMC article.
Prediction of the secondary structure of HIV-1 gp120.
Hansen JE, Lund O, Nielsen JO, Brunak S, Hansen JE. Hansen JE, et al. Among authors: brunak s. Proteins. 1996 May;25(1):1-11. doi: 10.1002/(SICI)1097-0134(199605)25:1<1::AID-PROT1>3.0.CO;2-N. Proteins. 1996. PMID: 8727315
Multiomics analysis of rheumatoid arthritis yields sequence variants that have large effects on risk of the seropositive subset.
Saevarsdottir S, Stefansdottir L, Sulem P, Thorleifsson G, Ferkingstad E, Rutsdottir G, Glintborg B, Westerlind H, Grondal G, Loft IC, Sorensen SB, Lie BA, Brink M, Ärlestig L, Arnthorsson AO, Baecklund E, Banasik K, Bank S, Bjorkman LI, Ellingsen T, Erikstrup C, Frei O, Gjertsson I, Gudbjartsson DF, Gudjonsson SA, Halldorsson GH, Hendricks O, Hillert J, Hogdall E, Jacobsen S, Jensen DV, Jonsson H, Kastbom A, Kockum I, Kristensen S, Kristjansdottir H, Larsen MH, Linauskas A, Hauge EM, Loft AG, Ludviksson BR, Lund SH, Markusson T, Masson G, Melsted P, Moore KHS, Munk H, Nielsen KR, Norddahl GL, Oddsson A, Olafsdottir TA, Olason PI, Olsson T, Ostrowski SR, Hørslev-Petersen K, Rognvaldsson S, Sanner H, Silberberg GN, Stefansson H, Sørensen E, Sørensen IJ, Turesson C, Bergman T, Alfredsson L, Kvien TK, Brunak S, Steinsson K, Andersen V, Andreassen OA, Rantapää-Dahlqvist S, Hetland ML, Klareskog L, Askling J, Padyukov L, Pedersen OB, Thorsteinsdottir U, Jonsdottir I, Stefansson K; Members of the DBDS Genomic Consortium; Danish RA Genetics Working Group; Swedish Rheumatology Quality Register Biobank Study Group (SRQb). Saevarsdottir S, et al. Among authors: brunak s. Ann Rheum Dis. 2022 Aug;81(8):1085-1095. doi: 10.1136/annrheumdis-2021-221754. Epub 2022 Apr 25. Ann Rheum Dis. 2022. PMID: 35470158 Free PMC article.
PhosphoBase: a database of phosphorylation sites.
Blom N, Kreegipuu A, Brunak S. Blom N, et al. Among authors: brunak s. Nucleic Acids Res. 1998 Jan 1;26(1):382-6. doi: 10.1093/nar/26.1.382. Nucleic Acids Res. 1998. PMID: 9399879 Free PMC article.
Cleaning the GenBank Arabidopsis thaliana data set.
Korning PG, Hebsgaard SM, Rouze P, Brunak S. Korning PG, et al. Among authors: brunak s. Nucleic Acids Res. 1996 Jan 15;24(2):316-20. doi: 10.1093/nar/24.2.316. Nucleic Acids Res. 1996. PMID: 8628656 Free PMC article.
521 results