Cohen KB - Search Results

1

Introduction to BLAH5 special issue: recent progress on interoperability of biomedical text mining.

Kim JD, Cohen KB, Collier N, Lu Z, Rinaldi F. Kim JD, et al. Among authors: cohen kb. Genomics Inform. 2019 Jun;17(2):e12. doi: 10.5808/GI.2019.17.2.e12. Epub 2019 Jun 27. Genomics Inform. 2019. PMID: 31307127 Free PMC article. No abstract available.

2

Editor's introduction to the special issue of the 6th Biomedical Linked Annotation Hackathon (BLAH6).

Kim JD, Cohen KB, Rinaldi F, Lu Z, Collier N, Park HS. Kim JD, et al. Among authors: cohen kb. Genomics Inform. 2020 Jun;18(2):e12. doi: 10.5808/GI.2020.18.2.e12. Epub 2020 Jun 24. Genomics Inform. 2020. PMID: 32634866 Free PMC article. No abstract available.

3

Editor's introduction to the special section on the 7th Biomedical Linked Annotation Hackathon (BLAH7).

Kim JD, Cohen KB, Rinaldi F, Lu Z, Park HS. Kim JD, et al. Among authors: cohen kb. Genomics Inform. 2021 Sep;19(3):e20. doi: 10.5808/gi.19.3.e1. Epub 2021 Sep 30. Genomics Inform. 2021. PMID: 34638167 Free PMC article. No abstract available.

4

BioC: a minimalist approach to interoperability for biomedical text processing.

Comeau DC, Islamaj Doğan R, Ciccarese P, Cohen KB, Krallinger M, Leitner F, Lu Z, Peng Y, Rinaldi F, Torii M, Valencia A, Verspoor K, Wiegers TC, Wu CH, Wilbur WJ. Comeau DC, et al. Among authors: cohen kb. Database (Oxford). 2013 Sep 18;2013:bat064. doi: 10.1093/database/bat064. Print 2013. Database (Oxford). 2013. PMID: 24048470 Free PMC article.

5

Evaluation of SPARQL query generation from natural language questions.

Cohen KB, Kim JD. Cohen KB, et al. Proc Conf Assoc Comput Linguist Meet. 2013 Sep;2013:3-7. Proc Conf Assoc Comput Linguist Meet. 2013. PMID: 33100503 Free PMC article.

6

Open Agile text mining for bioinformatics: the PubAnnotation ecosystem.

Kim JD, Wang Y, Fujiwara T, Okuda S, Callahan TJ, Cohen KB. Kim JD, et al. Among authors: cohen kb. Bioinformatics. 2019 Nov 1;35(21):4372-4380. doi: 10.1093/bioinformatics/btz227. Bioinformatics. 2019. PMID: 30937439 Free PMC article.

7

High-quality gene/disease embedding in a multi-relational heterogeneous graph after a joint matrix/tensor decomposition.

Zhou K, Zhang S, Wang Y, Cohen KB, Kim JD, Luo Q, Yao X, Zhou X, Xia J. Zhou K, et al. Among authors: cohen kb. J Biomed Inform. 2022 Feb;126:103973. doi: 10.1016/j.jbi.2021.103973. Epub 2022 Jan 4. J Biomed Inform. 2022. PMID: 34995810 Free article.

8

Concept recognition for extracting protein interaction relations from biomedical text.

Baumgartner WA Jr, Lu Z, Johnson HL, Caporaso JG, Paquette J, Lindemann A, White EK, Medvedeva O, Cohen KB, Hunter L. Baumgartner WA Jr, et al. Among authors: cohen kb. Genome Biol. 2008;9 Suppl 2(Suppl 2):S9. doi: 10.1186/gb-2008-9-s2-s9. Epub 2008 Sep 1. Genome Biol. 2008. PMID: 18834500 Free PMC article.

9

Finding GeneRIFs via gene ontology annotations.

Lu Z, Cohen KB, Hunter L. Lu Z, et al. Among authors: cohen kb. Pac Symp Biocomput. 2006:52-63. Pac Symp Biocomput. 2006. PMID: 17094227 Free PMC article.

10

GeneRIF quality assurance as summary revision.

Lu Z, Cohen KB, Hunter L. Lu Z, et al. Among authors: cohen kb. Pac Symp Biocomput. 2007:269-80. doi: 10.1142/9789812772435_0026. Pac Symp Biocomput. 2007. PMID: 17990498 Free PMC article.

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