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De novo assembly of a haplotype-resolved human genome.
Cao H, Wu H, Luo R, Huang S, Sun Y, Tong X, Xie Y, Liu B, Yang H, Zheng H, Li J, Li B, Wang Y, Yang F, Sun P, Liu S, Gao P, Huang H, Sun J, Chen D, He G, Huang W, Huang Z, Li Y, Tellier LC, Liu X, Feng Q, Xu X, Zhang X, Bolund L, Krogh A, Kristiansen K, Drmanac R, Drmanac S, Nielsen R, Li S, Wang J, Yang H, Li Y, Wong GK, Wang J. Cao H, et al. Among authors: drmanac r, drmanac s. Nat Biotechnol. 2015 Jun;33(6):617-22. doi: 10.1038/nbt.3200. Epub 2015 May 25. Nat Biotechnol. 2015. PMID: 26006006
cPAS-based sequencing on the BGISEQ-500 to explore small non-coding RNAs.
Fehlmann T, Reinheimer S, Geng C, Su X, Drmanac S, Alexeev A, Zhang C, Backes C, Ludwig N, Hart M, An D, Zhu Z, Xu C, Chen A, Ni M, Liu J, Li Y, Poulter M, Li Y, Stähler C, Drmanac R, Xu X, Meese E, Keller A. Fehlmann T, et al. Among authors: drmanac r, drmanac s. Clin Epigenetics. 2016 Nov 21;8:123. doi: 10.1186/s13148-016-0287-1. eCollection 2016. Clin Epigenetics. 2016. PMID: 27895807 Free PMC article.
Reliable multiplex sequencing with rare index mis-assignment on DNB-based NGS platform.
Li Q, Zhao X, Zhang W, Wang L, Wang J, Xu D, Mei Z, Liu Q, Du S, Li Z, Liang X, Wang X, Wei H, Liu P, Zou J, Shen H, Chen A, Drmanac S, Liu JS, Li L, Jiang H, Zhang Y, Wang J, Yang H, Xu X, Drmanac R, Jiang Y. Li Q, et al. Among authors: drmanac r, drmanac s. BMC Genomics. 2019 Mar 13;20(1):215. doi: 10.1186/s12864-019-5569-5. BMC Genomics. 2019. PMID: 30866797 Free PMC article.
Efficient and unique cobarcoding of second-generation sequencing reads from long DNA molecules enabling cost-effective and accurate sequencing, haplotyping, and de novo assembly.
Wang O, Chin R, Cheng X, Wu MKY, Mao Q, Tang J, Sun Y, Anderson E, Lam HK, Chen D, Zhou Y, Wang L, Fan F, Zou Y, Xie Y, Zhang RY, Drmanac S, Nguyen D, Xu C, Villarosa C, Gablenz S, Barua N, Nguyen S, Tian W, Liu JS, Wang J, Liu X, Qi X, Chen A, Wang H, Dong Y, Zhang W, Alexeev A, Yang H, Wang J, Kristiansen K, Xu X, Drmanac R, Peters BA. Wang O, et al. Among authors: drmanac r, drmanac s. Genome Res. 2019 May;29(5):798-808. doi: 10.1101/gr.245126.118. Epub 2019 Apr 2. Genome Res. 2019. PMID: 30940689 Free PMC article.
CoolMPS: evaluation of antibody labeling based massively parallel non-coding RNA sequencing.
Li Y, Fehlmann T, Borcherding A, Drmanac S, Liu S, Groeger L, Xu C, Callow M, Villarosa C, Jorjorian A, Kern F, Grammes N, Meese E, Jiang H, Drmanac R, Ludwig N, Keller A. Li Y, et al. Among authors: drmanac r. Nucleic Acids Res. 2021 Jan 25;49(2):e10. doi: 10.1093/nar/gkaa1122. Nucleic Acids Res. 2021. PMID: 33290507 Free PMC article.
Comparison of long-read methods for sequencing and assembly of a plant genome.
Murigneux V, Rai SK, Furtado A, Bruxner TJC, Tian W, Harliwong I, Wei H, Yang B, Ye Q, Anderson E, Mao Q, Drmanac R, Wang O, Peters BA, Xu M, Wu P, Topp B, Coin LJM, Henry RJ. Murigneux V, et al. Among authors: drmanac r. Gigascience. 2020 Dec 21;9(12):giaa146. doi: 10.1093/gigascience/giaa146. Gigascience. 2020. PMID: 33347571 Free PMC article.
75 results