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Inferring whole-genome histories in large population datasets.
Kelleher J, Wong Y, Wohns AW, Fadil C, Albers PK, McVean G. Kelleher J, et al. Among authors: wong y. Nat Genet. 2019 Sep;51(9):1330-1338. doi: 10.1038/s41588-019-0483-y. Epub 2019 Sep 2. Nat Genet. 2019. PMID: 31477934 Free PMC article.
Efficient ancestry and mutation simulation with msprime 1.0.
Baumdicker F, Bisschop G, Goldstein D, Gower G, Ragsdale AP, Tsambos G, Zhu S, Eldon B, Ellerman EC, Galloway JG, Gladstein AL, Gorjanc G, Guo B, Jeffery B, Kretzschumar WW, Lohse K, Matschiner M, Nelson D, Pope NS, Quinto-Cortés CD, Rodrigues MF, Saunack K, Sellinger T, Thornton K, van Kemenade H, Wohns AW, Wong Y, Gravel S, Kern AD, Koskela J, Ralph PL, Kelleher J. Baumdicker F, et al. Among authors: wong y. Genetics. 2022 Mar 3;220(3):iyab229. doi: 10.1093/genetics/iyab229. Genetics. 2022. PMID: 34897427 Free PMC article.
A unified genealogy of modern and ancient genomes.
Wohns AW, Wong Y, Jeffery B, Akbari A, Mallick S, Pinhasi R, Patterson N, Reich D, Kelleher J, McVean G. Wohns AW, et al. Among authors: wong y. Science. 2022 Feb 25;375(6583):eabi8264. doi: 10.1126/science.abi8264. Epub 2022 Feb 25. Science. 2022. PMID: 35201891 Free PMC article.
Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations.
Lauterbur ME, Cavassim MIA, Gladstein AL, Gower G, Pope NS, Tsambos G, Adrion J, Belsare S, Biddanda A, Caudill V, Cury J, Echevarria I, Haller BC, Hasan AR, Huang X, Iasi LNM, Noskova E, Obsteter J, Pavinato VAC, Pearson A, Peede D, Perez MF, Rodrigues MF, Smith CCR, Spence JP, Teterina A, Tittes S, Unneberg P, Vazquez JM, Waples RK, Wohns AW, Wong Y, Baumdicker F, Cartwright RA, Gorjanc G, Gutenkunst RN, Kelleher J, Kern AD, Ragsdale AP, Ralph PL, Schrider DR, Gronau I. Lauterbur ME, et al. Among authors: wong y. Elife. 2023 Jun 21;12:RP84874. doi: 10.7554/eLife.84874. Elife. 2023. PMID: 37342968 Free PMC article.
Representation of genomic intratumor heterogeneity in multi-region non-small cell lung cancer patient-derived xenograft models.
Hynds RE, Huebner A, Pearce DR, Hill MS, Akarca AU, Moore DA, Ward S, Gowers KHC, Karasaki T, Al Bakir M, Wilson GA, Pich O, Martínez-Ruiz C, Hossain ASMM, Pearce SP, Sivakumar M, Ben Aissa A, Grönroos E, Chandrasekharan D, Kolluri KK, Towns R, Wang K, Cook DE, Bosshard-Carter L, Naceur-Lombardelli C, Rowan AJ, Veeriah S, Litchfield K, Crosbie PAJ, Dive C, Quezada SA, Janes SM, Jamal-Hanjani M, Marafioti T; TRACERx consortium; McGranahan N, Swanton C. Hynds RE, et al. Nat Commun. 2024 May 31;15(1):4653. doi: 10.1038/s41467-024-47547-3. Nat Commun. 2024. PMID: 38821942 Free PMC article.
Short preconditioning with TGFβ of equine adipose tissue-derived mesenchymal stem cells predisposes towards an anti-fibrotic secretory phenotype: A possible tool for treatment of endometrosis in mares.
Wong YS, Mançanares AC, Navarrete F, Poblete P, Mendez-Pérez L, Rodriguez-Alvarez L, Castro FO. Wong YS, et al. Theriogenology. 2024 May 24;225:119-129. doi: 10.1016/j.theriogenology.2024.05.018. Online ahead of print. Theriogenology. 2024. PMID: 38805994
4,030 results