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Community curation of bioinformatics software and data resources.
Ison J, Ménager H, Brancotte B, Jaaniso E, Salumets A, Raček T, Lamprecht AL, Palmblad M, Kalaš M, Chmura P, Hancock JM, Schwämmle V, Ienasescu HI. Ison J, et al. Among authors: salumets a. Brief Bioinform. 2020 Sep 25;21(5):1697-1705. doi: 10.1093/bib/bbz075. Brief Bioinform. 2020. PMID: 31624831 Free PMC article.
The bio.tools registry of software tools and data resources for the life sciences.
Ison J, Ienasescu H, Chmura P, Rydza E, Ménager H, Kalaš M, Schwämmle V, Grüning B, Beard N, Lopez R, Duvaud S, Stockinger H, Persson B, Vařeková RS, Raček T, Vondrášek J, Peterson H, Salumets A, Jonassen I, Hooft R, Nyrönen T, Valencia A, Capella S, Gelpí J, Zambelli F, Savakis B, Leskošek B, Rapacki K, Blanchet C, Jimenez R, Oliveira A, Vriend G, Collin O, van Helden J, Løngreen P, Brunak S. Ison J, et al. Among authors: salumets a. Genome Biol. 2019 Aug 12;20(1):164. doi: 10.1186/s13059-019-1772-6. Genome Biol. 2019. PMID: 31405382 Free PMC article.
Longitudinal proteomic profiling reveals increased early inflammation and sustained apoptosis proteins in severe COVID-19.
Haljasmägi L, Salumets A, Rumm AP, Jürgenson M, Krassohhina E, Remm A, Sein H, Kareinen L, Vapalahti O, Sironen T, Peterson H, Milani L, Tamm A, Hayday A, Kisand K, Peterson P. Haljasmägi L, et al. Among authors: salumets a. Sci Rep. 2020 Nov 25;10(1):20533. doi: 10.1038/s41598-020-77525-w. Sci Rep. 2020. PMID: 33239683 Free PMC article.
Long-Term Elevated Inflammatory Protein Levels in Asymptomatic SARS-CoV-2 Infected Individuals.
Tserel L, Jõgi P, Naaber P, Maslovskaja J, Häling A, Salumets A, Zusinaite E, Soeorg H, Lättekivi F, Ingerainen D, Soots M, Toompere K, Kaarna K, Kisand K, Lutsar I, Peterson P. Tserel L, et al. Among authors: salumets a. Front Immunol. 2021 Sep 17;12:709759. doi: 10.3389/fimmu.2021.709759. eCollection 2021. Front Immunol. 2021. PMID: 34603283 Free PMC article.
AI-algorithm training and validation for identification of endometrial CD138+ cells in infertility-associated conditions; polycystic ovary syndrome (PCOS) and recurrent implantation failure (RIF).
Lee S, Arffman RK, Komsi EK, Lindgren O, Kemppainen JA, Metsola H, Rossi HR, Ahtikoski A, Kask K, Saare M, Salumets A, Piltonen TT. Lee S, et al. Among authors: salumets a. J Pathol Inform. 2024 Apr 29;15:100380. doi: 10.1016/j.jpi.2024.100380. eCollection 2024 Dec. J Pathol Inform. 2024. PMID: 38827567 Free PMC article.
The profile of steroid hormones in human fetal and adult ovaries.
Vazakidou P, Evangelista S, Li T, Lecante LL, Rosenberg K, Koekkoek J, Salumets A, Velthut-Meikas A, Damdimopoulou P, Mazaud-Guittot S, Fowler PA, Leonards PEG, van Duursen MBM. Vazakidou P, et al. Among authors: salumets a. Reprod Biol Endocrinol. 2024 May 22;22(1):60. doi: 10.1186/s12958-024-01233-7. Reprod Biol Endocrinol. 2024. PMID: 38778396 Free PMC article.
Mitochondrial Venus is more likely to have a lower birthweight.
Aleksejeva E, Esteki MZ, Salumets A. Aleksejeva E, et al. Among authors: salumets a. Trends Endocrinol Metab. 2024 Apr 24:S1043-2760(24)00094-8. doi: 10.1016/j.tem.2024.04.011. Online ahead of print. Trends Endocrinol Metab. 2024. PMID: 38664152 Free article.
243 results