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Genome3D: integrating a collaborative data pipeline to expand the depth and breadth of consensus protein structure annotation.
Sillitoe I, Andreeva A, Blundell TL, Buchan DWA, Finn RD, Gough J, Jones D, Kelley LA, Paysan-Lafosse T, Lam SD, Murzin AG, Pandurangan AP, Salazar GA, Skwark MJ, Sternberg MJE, Velankar S, Orengo C. Sillitoe I, et al. Among authors: lam sd. Nucleic Acids Res. 2020 Jan 8;48(D1):D314-D319. doi: 10.1093/nar/gkz967. Nucleic Acids Res. 2020. PMID: 31733063 Free PMC article.
Gene3D: expanding the utility of domain assignments.
Lam SD, Dawson NL, Das S, Sillitoe I, Ashford P, Lee D, Lehtinen S, Orengo CA, Lees JG. Lam SD, et al. Nucleic Acids Res. 2016 Jan 4;44(D1):D404-9. doi: 10.1093/nar/gkv1231. Epub 2015 Nov 17. Nucleic Acids Res. 2016. PMID: 26578585 Free PMC article.
Gene3D: Extensive prediction of globular domains in proteins.
Lewis TE, Sillitoe I, Dawson N, Lam SD, Clarke T, Lee D, Orengo C, Lees J. Lewis TE, et al. Among authors: lam sd. Nucleic Acids Res. 2018 Jan 4;46(D1):D435-D439. doi: 10.1093/nar/gkx1069. Nucleic Acids Res. 2018. PMID: 29112716 Free PMC article.
Gene3D: Extensive prediction of globular domains in proteins.
Lewis TE, Sillitoe I, Dawson N, Lam SD, Clarke T, Lee D, Orengo C, Lees J. Lewis TE, et al. Among authors: lam sd. Nucleic Acids Res. 2018 Jan 4;46(D1):D1282. doi: 10.1093/nar/gkx1187. Nucleic Acids Res. 2018. PMID: 29194501 Free PMC article. No abstract available.
CATH: increased structural coverage of functional space.
Sillitoe I, Bordin N, Dawson N, Waman VP, Ashford P, Scholes HM, Pang CSM, Woodridge L, Rauer C, Sen N, Abbasian M, Le Cornu S, Lam SD, Berka K, Varekova IH, Svobodova R, Lees J, Orengo CA. Sillitoe I, et al. Among authors: lam sd. Nucleic Acids Res. 2021 Jan 8;49(D1):D266-D273. doi: 10.1093/nar/gkaa1079. Nucleic Acids Res. 2021. PMID: 33237325 Free PMC article.
Biological impact of mutually exclusive exon switching.
Lam SD, Babu MM, Lees J, Orengo CA. Lam SD, et al. PLoS Comput Biol. 2021 Mar 2;17(3):e1008708. doi: 10.1371/journal.pcbi.1008708. eCollection 2021 Mar. PLoS Comput Biol. 2021. PMID: 33651795 Free PMC article.
22 results