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Epigenomic characterization of Clostridioides difficile finds a conserved DNA methyltransferase that mediates sporulation and pathogenesis.
Nat Microbiol. 2020 Jan;5(1):166-180. doi: 10.1038/s41564-019-0613-4. Epub 2019 Nov 25.
Nat Microbiol. 2020.
PMID: 31768029
Free PMC article.
The Conserved Spore Coat Protein SpoVM Is Largely Dispensable in Clostridium difficile Spore Formation.
Ribis JW, Ravichandran P, Putnam EE, Pishdadian K, Shen A.
Ribis JW, et al.
mSphere. 2017 Sep 20;2(5):e00315-17. doi: 10.1128/mSphere.00315-17. eCollection 2017 Sep-Oct.
mSphere. 2017.
PMID: 28959733
Free PMC article.
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Differential requirements for conserved peptidoglycan remodeling enzymes during Clostridioides difficile spore formation.
Ribis JW, Fimlaid KA, Shen A.
Ribis JW, et al.
Mol Microbiol. 2018 Nov;110(3):370-389. doi: 10.1111/mmi.14090.
Mol Microbiol. 2018.
PMID: 30066347
Free PMC article.
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Development of a Dual-Fluorescent-Reporter System in Clostridioides difficile Reveals a Division of Labor between Virulence and Transmission Gene Expression.
Donnelly ML, Shrestha S, Ribis JW, Kuhn P, Krasilnikov M, Alves Feliciano C, Shen A.
Donnelly ML, et al. Among authors: ribis jw.
mSphere. 2022 Jun 29;7(3):e0013222. doi: 10.1128/msphere.00132-22. Epub 2022 May 31.
mSphere. 2022.
PMID: 35638354
Free PMC article.
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Single-spore germination analyses reveal that calcium released during Clostridioides difficile germination functions in a feedforward loop.
Ribis JW, Melo L, Shrestha S, Giacalone D, Rodriguez EE, Shen A, Rohlfing A.
Ribis JW, et al.
mSphere. 2023 Aug 24;8(4):e0000523. doi: 10.1128/msphere.00005-23. Epub 2023 Jun 20.
mSphere. 2023.
PMID: 37338207
Free PMC article.
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Protocol for quantifying the germination properties of individual bacterial endospores using PySpore.
Ribis JW, Shen A.
Ribis JW, et al.
STAR Protoc. 2023 Dec 15;4(4):102678. doi: 10.1016/j.xpro.2023.102678. Epub 2023 Oct 30.
STAR Protoc. 2023.
PMID: 37910513
Free PMC article.
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Pulmonary Surfactant Promotes Virulence Gene Expression and Biofilm Formation in Klebsiella pneumoniae.
Willsey GG, Ventrone S, Schutz KC, Wallace AM, Ribis JW, Suratt BT, Wargo MJ.
Willsey GG, et al. Among authors: ribis jw.
Infect Immun. 2018 Jun 21;86(7):e00135-18. doi: 10.1128/IAI.00135-18. Print 2018 Jul.
Infect Immun. 2018.
PMID: 29712730
Free PMC article.
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