Braakman R - Search Results

1

Untargeted accurate identification of highly pathogenic bacteria directly from blood culture flasks.

Berendsen EM, Levin E, Braakman R, Prodan A, van Leeuwen HC, Paauw A. Berendsen EM, et al. Among authors: braakman r. Int J Med Microbiol. 2020 Jan;310(1):151376. doi: 10.1016/j.ijmm.2019.151376. Epub 2019 Nov 11. Int J Med Microbiol. 2020. PMID: 31784214 Free article.

2

Identification of microorganisms grown in blood culture flasks using liquid chromatography-tandem mass spectrometry.

Berendsen EM, Levin E, Braakman R, der Riet-van Oeveren DV, Sedee NJ, Paauw A. Berendsen EM, et al. Among authors: braakman r. Future Microbiol. 2017 Oct;12:1135-1145. doi: 10.2217/fmb-2017-0050. Epub 2017 Sep 15. Future Microbiol. 2017. PMID: 28972417 Free article.

3

The advantage of laser-capture microdissection over whole tissue analysis in proteomic profiling studies.

De Marchi T, Braakman RB, Stingl C, van Duijn MM, Smid M, Foekens JA, Luider TM, Martens JW, Umar A. De Marchi T, et al. Proteomics. 2016 May;16(10):1474-85. doi: 10.1002/pmic.201600004. Epub 2016 Apr 28. Proteomics. 2016. PMID: 27030549

4

Optimized nLC-MS workflow for laser capture microdissected breast cancer tissue.

Braakman RB, Tilanus-Linthorst MM, Liu NQ, Stingl C, Dekker LJ, Luider TM, Martens JW, Foekens JA, Umar A. Braakman RB, et al. J Proteomics. 2012 Jun 6;75(10):2844-54. doi: 10.1016/j.jprot.2012.01.022. Epub 2012 Jan 24. J Proteomics. 2012. PMID: 22296676

5

Laser capture microdissection applications in breast cancer proteomics.

Braakman RB, Luider TM, Martens JW, Foekens JA, Umar A. Braakman RB, et al. Methods Mol Biol. 2011;755:143-54. doi: 10.1007/978-1-61779-163-5_11. Methods Mol Biol. 2011. PMID: 21761300

6

Shotgun proteomics on tissue specimens extracted with Acid guanidinium-thiocyanate-phenol-chloroform.

Braakman RB, Sieuwerts AM, Umar A. Braakman RB, et al. Methods Mol Biol. 2015;1293:115-22. doi: 10.1007/978-1-4939-2519-3_6. Methods Mol Biol. 2015. PMID: 26040684

7

Proteomics pipeline for biomarker discovery of laser capture microdissected breast cancer tissue.

Liu NQ, Braakman RB, Stingl C, Luider TM, Martens JW, Foekens JA, Umar A. Liu NQ, et al. J Mammary Gland Biol Neoplasia. 2012 Jun;17(2):155-64. doi: 10.1007/s10911-012-9252-6. Epub 2012 May 30. J Mammary Gland Biol Neoplasia. 2012. PMID: 22644111 Free PMC article. Review.

8

Integrative analysis of genomics and proteomics data on clinical breast cancer tissue specimens extracted with acid guanidinium thiocyanate-phenol-chloroform.

Braakman RB, Bezstarosti K, Sieuwerts AM, de Weerd V, van Galen AM, Stingl C, Luider TM, Timmermans MA, Smid M, Martens JW, Foekens JA, Demmers JA, Umar A. Braakman RB, et al. J Proteome Res. 2015 Mar 6;14(3):1627-36. doi: 10.1021/acs.jproteome.5b00046. Epub 2015 Feb 2. J Proteome Res. 2015. PMID: 25611981

9

Targeted MS Assay Predicting Tamoxifen Resistance in Estrogen-Receptor-Positive Breast Cancer Tissues and Sera.

De Marchi T, Kuhn E, Dekker LJ, Stingl C, Braakman RB, Opdam M, Linn SC, Sweep FC, Span PN, Luider TM, Foekens JA, Martens JW, Carr SA, Umar A. De Marchi T, et al. J Proteome Res. 2016 Apr 1;15(4):1230-42. doi: 10.1021/acs.jproteome.5b01119. Epub 2016 Mar 18. J Proteome Res. 2016. PMID: 26958999

10

Proteomic characterization of microdissected breast tissue environment provides a protein-level overview of malignant transformation.

Braakman RB, Stingl C, Tilanus-Linthorst MM, van Deurzen CH, Timmermans MA, Smid M, Foekens JA, Luider TM, Martens JW, Umar A. Braakman RB, et al. Proteomics. 2017 Mar;17(5):1600213. doi: 10.1002/pmic.201600213. Proteomics. 2017. PMID: 28058811 Free PMC article.

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