Vaske CJ - Search Results

1

A deep learning image-based intrinsic molecular subtype classifier of breast tumors reveals tumor heterogeneity that may affect survival.

Jaber MI, Song B, Taylor C, Vaske CJ, Benz SC, Rabizadeh S, Soon-Shiong P, Szeto CW. Jaber MI, et al. Among authors: vaske cj. Breast Cancer Res. 2020 Jan 28;22(1):12. doi: 10.1186/s13058-020-1248-3. Breast Cancer Res. 2020. PMID: 31992350 Free PMC article.

2

Inference of patient-specific pathway activities from multi-dimensional cancer genomics data using PARADIGM.

Vaske CJ, Benz SC, Sanborn JZ, Earl D, Szeto C, Zhu J, Haussler D, Stuart JM. Vaske CJ, et al. Bioinformatics. 2010 Jun 15;26(12):i237-45. doi: 10.1093/bioinformatics/btq182. Bioinformatics. 2010. PMID: 20529912 Free PMC article.

3

The UCSC Cancer Genomics Browser: update 2011.

Sanborn JZ, Benz SC, Craft B, Szeto C, Kober KM, Meyer L, Vaske CJ, Goldman M, Smith KE, Kuhn RM, Karolchik D, Kent WJ, Stuart JM, Haussler D, Zhu J. Sanborn JZ, et al. Among authors: vaske cj. Nucleic Acids Res. 2011 Jan;39(Database issue):D951-9. doi: 10.1093/nar/gkq1113. Epub 2010 Nov 8. Nucleic Acids Res. 2011. PMID: 21059681 Free PMC article.

4

Comprehensive molecular characterization of human colon and rectal cancer.

Cancer Genome Atlas Network. Cancer Genome Atlas Network. Nature. 2012 Jul 18;487(7407):330-7. doi: 10.1038/nature11252. Nature. 2012. PMID: 22810696 Free PMC article.

5

The UCSC Interaction Browser: multidimensional data views in pathway context.

Wong CK, Vaske CJ, Ng S, Sanborn JZ, Benz SC, Haussler D, Stuart JM. Wong CK, et al. Among authors: vaske cj. Nucleic Acids Res. 2013 Jul;41(Web Server issue):W218-24. doi: 10.1093/nar/gkt473. Epub 2013 Jun 8. Nucleic Acids Res. 2013. PMID: 23748957 Free PMC article.

6

Learning subgroup-specific regulatory interactions and regulator independence with PARADIGM.

Sedgewick AJ, Benz SC, Rabizadeh S, Soon-Shiong P, Vaske CJ. Sedgewick AJ, et al. Among authors: vaske cj. Bioinformatics. 2013 Jul 1;29(13):i62-70. doi: 10.1093/bioinformatics/btt229. Bioinformatics. 2013. PMID: 23813010 Free PMC article.

7

The Cancer Genome Atlas Pan-Cancer analysis project.

Cancer Genome Atlas Research Network; Weinstein JN, Collisson EA, Mills GB, Shaw KR, Ozenberger BA, Ellrott K, Shmulevich I, Sander C, Stuart JM. Cancer Genome Atlas Research Network, et al. Nat Genet. 2013 Oct;45(10):1113-20. doi: 10.1038/ng.2764. Nat Genet. 2013. PMID: 24071849 Free PMC article.

8

FOXM1 cistrome predicts breast cancer metastatic outcome better than FOXM1 expression levels or tumor proliferation index.

Yau C, Meyer L, Benz S, Vaske C, Scott G, Egan B, Labhart P, Pourmand N, Benz CC. Yau C, et al. Breast Cancer Res Treat. 2015 Nov;154(1):23-32. doi: 10.1007/s10549-015-3589-7. Epub 2015 Oct 12. Breast Cancer Res Treat. 2015. PMID: 26456572

9

Integrative clustering reveals a novel split in the luminal A subtype of breast cancer with impact on outcome.

Aure MR, Vitelli V, Jernström S, Kumar S, Krohn M, Due EU, Haukaas TH, Leivonen SK, Vollan HK, Lüders T, Rødland E, Vaske CJ, Zhao W, Møller EK, Nord S, Giskeødegård GF, Bathen TF, Caldas C, Tramm T, Alsner J, Overgaard J, Geisler J, Bukholm IR, Naume B, Schlichting E, Sauer T, Mills GB, Kåresen R, Mælandsmo GM, Lingjærde OC, Frigessi A, Kristensen VN, Børresen-Dale AL, Sahlberg KK; OSBREAC. Aure MR, et al. Among authors: vaske cj. Breast Cancer Res. 2017 Mar 29;19(1):44. doi: 10.1186/s13058-017-0812-y. Breast Cancer Res. 2017. PMID: 28356166 Free PMC article.

10

Cell of origin and mutation pattern define three clinically distinct classes of sebaceous carcinoma.

North JP, Golovato J, Vaske CJ, Sanborn JZ, Nguyen A, Wu W, Goode B, Stevers M, McMullen K, Perez White BE, Collisson EA, Bloomer M, Solomon DA, Benz SC, Cho RJ. North JP, et al. Among authors: vaske cj. Nat Commun. 2018 May 14;9(1):1894. doi: 10.1038/s41467-018-04008-y. Nat Commun. 2018. PMID: 29760388 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

33 results

Search Page