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BicOverlapper: a tool for bicluster visualization.
Santamaría R, Therón R, Quintales L. Santamaría R, et al. Bioinformatics. 2008 May 1;24(9):1212-3. doi: 10.1093/bioinformatics/btn076. Epub 2008 Mar 5. Bioinformatics. 2008. PMID: 18321885
Treevolution: visual analysis of phylogenetic trees.
Santamaría R, Therón R. Santamaría R, et al. Bioinformatics. 2009 Aug 1;25(15):1970-1. doi: 10.1093/bioinformatics/btp333. Epub 2009 May 26. Bioinformatics. 2009. PMID: 19470585
BicOverlapper 2.0: visual analysis for gene expression.
Santamaría R, Therón R, Quintales L. Santamaría R, et al. Bioinformatics. 2014 Jun 15;30(12):1785-6. doi: 10.1093/bioinformatics/btu120. Epub 2014 Mar 3. Bioinformatics. 2014. PMID: 24590442 Free PMC article.
Voronto: mapper for expression data to ontologies.
Santamaría R, Pierre P. Santamaría R, et al. Bioinformatics. 2012 Sep 1;28(17):2281-2. doi: 10.1093/bioinformatics/bts428. Epub 2012 Jul 4. Bioinformatics. 2012. PMID: 22764160
Genome-wide search of nucleosome patterns using visual analytics.
Santamaría R, Therón R, Durán L, García A, González S, Sánchez M, Antequera F. Santamaría R, et al. Bioinformatics. 2019 Jul 1;35(13):2185-2192. doi: 10.1093/bioinformatics/bty971. Bioinformatics. 2019. PMID: 30496344 Free PMC article.
RUN and FYVE domain-containing protein 4 enhances autophagy and lysosome tethering in response to Interleukin-4.
Terawaki S, Camosseto V, Prete F, Wenger T, Papadopoulos A, Rondeau C, Combes A, Rodriguez Rodrigues C, Vu Manh TP, Fallet M, English L, Santamaria R, Soares AR, Weil T, Hammad H, Desjardins M, Gorvel JP, Santos MA, Gatti E, Pierre P. Terawaki S, et al. Among authors: santamaria r. J Cell Biol. 2015 Sep 28;210(7):1133-52. doi: 10.1083/jcb.201501059. J Cell Biol. 2015. PMID: 26416964 Free PMC article.
399 results