Marioni JC - Search Results

1

Quantitative genetic analysis deciphers the impact of cis and trans regulation on cell-to-cell variability in protein expression levels.

Morgan MD, Patin E, Jagla B, Hasan M, Quintana-Murci L, Marioni JC. Morgan MD, et al. Among authors: marioni jc. PLoS Genet. 2020 Mar 13;16(3):e1008686. doi: 10.1371/journal.pgen.1008686. eCollection 2020 Mar. PLoS Genet. 2020. PMID: 32168362 Free PMC article.

2

A genome-wide study of DNA methylation patterns and gene expression levels in multiple human and chimpanzee tissues.

Pai AA, Bell JT, Marioni JC, Pritchard JK, Gilad Y. Pai AA, et al. Among authors: marioni jc. PLoS Genet. 2011 Feb;7(2):e1001316. doi: 10.1371/journal.pgen.1001316. Epub 2011 Feb 24. PLoS Genet. 2011. PMID: 21383968 Free PMC article.

3

Extensive compensatory cis-trans regulation in the evolution of mouse gene expression.

Goncalves A, Leigh-Brown S, Thybert D, Stefflova K, Turro E, Flicek P, Brazma A, Odom DT, Marioni JC. Goncalves A, et al. Among authors: marioni jc. Genome Res. 2012 Dec;22(12):2376-84. doi: 10.1101/gr.142281.112. Epub 2012 Aug 23. Genome Res. 2012. PMID: 22919075 Free PMC article.

4

Long-range enhancers regulating Myc expression are required for normal facial morphogenesis.

Uslu VV, Petretich M, Ruf S, Langenfeld K, Fonseca NA, Marioni JC, Spitz F. Uslu VV, et al. Among authors: marioni jc. Nat Genet. 2014 Jul;46(7):753-8. doi: 10.1038/ng.2971. Epub 2014 May 25. Nat Genet. 2014. PMID: 24859337

5

Interplay of cis and trans mechanisms driving transcription factor binding and gene expression evolution.

Wong ES, Schmitt BM, Kazachenka A, Thybert D, Redmond A, Connor F, Rayner TF, Feig C, Ferguson-Smith AC, Marioni JC, Odom DT, Flicek P. Wong ES, et al. Among authors: marioni jc. Nat Commun. 2017 Oct 23;8(1):1092. doi: 10.1038/s41467-017-01037-x. Nat Commun. 2017. PMID: 29061983 Free PMC article.

6

Batch effects in single-cell RNA-sequencing data are corrected by matching mutual nearest neighbors.

Haghverdi L, Lun ATL, Morgan MD, Marioni JC. Haghverdi L, et al. Among authors: marioni jc. Nat Biotechnol. 2018 Jun;36(5):421-427. doi: 10.1038/nbt.4091. Epub 2018 Apr 2. Nat Biotechnol. 2018. PMID: 29608177 Free PMC article.

7

CpG island composition differences are a source of gene expression noise indicative of promoter responsiveness.

Morgan MD, Marioni JC. Morgan MD, et al. Among authors: marioni jc. Genome Biol. 2018 Jun 26;19(1):81. doi: 10.1186/s13059-018-1461-x. Genome Biol. 2018. PMID: 29945659 Free PMC article.

8

Maturing Human CD127+ CCR7+ PDL1+ Dendritic Cells Express AIRE in the Absence of Tissue Restricted Antigens.

Fergusson JR, Morgan MD, Bruchard M, Huitema L, Heesters BA, van Unen V, van Hamburg JP, van der Wel NN, Picavet D, Koning F, Tas SW, Anderson MS, Marioni JC, Holländer GA, Spits H. Fergusson JR, et al. Among authors: marioni jc. Front Immunol. 2019 Jan 14;9:2902. doi: 10.3389/fimmu.2018.02902. eCollection 2018. Front Immunol. 2019. PMID: 30692988 Free PMC article.

9

Challenges in measuring and understanding biological noise.

Eling N, Morgan MD, Marioni JC. Eling N, et al. Among authors: marioni jc. Nat Rev Genet. 2019 Sep;20(9):536-548. doi: 10.1038/s41576-019-0130-6. Nat Rev Genet. 2019. PMID: 31114032 Free PMC article. Review.

10

Author Correction: Challenges in measuring and understanding biological noise.

Eling N, Morgan MD, Marioni JC. Eling N, et al. Among authors: marioni jc. Nat Rev Genet. 2019 Sep;20(9):562. doi: 10.1038/s41576-019-0142-2. Nat Rev Genet. 2019. PMID: 31160790

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