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Cardelino: computational integration of somatic clonal substructure and single-cell transcriptomes.
Nat Methods. 2020 Apr;17(4):414-421. doi: 10.1038/s41592-020-0766-3. Epub 2020 Mar 16.
Nat Methods. 2020.
PMID: 32203388
Computational approaches for interpreting scRNA-seq data.
Rostom R, Svensson V, Teichmann SA, Kar G.
Rostom R, et al.
FEBS Lett. 2017 Aug;591(15):2213-2225. doi: 10.1002/1873-3468.12684. Epub 2017 Jun 12.
FEBS Lett. 2017.
PMID: 28524227
Free PMC article.
Review.
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Gene expression variability across cells and species shapes innate immunity.
Hagai T, Chen X, Miragaia RJ, Rostom R, Gomes T, Kunowska N, Henriksson J, Park JE, Proserpio V, Donati G, Bossini-Castillo L, Vieira Braga FA, Naamati G, Fletcher J, Stephenson E, Vegh P, Trynka G, Kondova I, Dennis M, Haniffa M, Nourmohammad A, Lässig M, Teichmann SA.
Hagai T, et al. Among authors: rostom r.
Nature. 2018 Nov;563(7730):197-202. doi: 10.1038/s41586-018-0657-2. Epub 2018 Oct 24.
Nature. 2018.
PMID: 30356220
Free PMC article.
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Mapping interindividual dynamics of innate immune response at single-cell resolution.
Kumasaka N, Rostom R, Huang N, Polanski K, Meyer KB, Patel S, Boyd R, Gomez C, Barnett SN, Panousis NI, Schwartzentruber J, Ghoussaini M, Lyons PA, Calero-Nieto FJ, Göttgens B, Barnes JL, Worlock KB, Yoshida M, Nikolić MZ, Stephenson E, Reynolds G, Haniffa M, Marioni JC, Stegle O, Hagai T, Teichmann SA.
Kumasaka N, et al. Among authors: rostom r.
Nat Genet. 2023 Jun;55(6):1066-1075. doi: 10.1038/s41588-023-01421-y. Epub 2023 Jun 12.
Nat Genet. 2023.
PMID: 37308670
Free PMC article.
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Mapping small molecule binding data to structural domains.
Kruger FA, Rostom R, Overington JP.
Kruger FA, et al. Among authors: rostom r.
BMC Bioinformatics. 2012;13 Suppl 17(Suppl 17):S11. doi: 10.1186/1471-2105-13-S17-S11. Epub 2012 Dec 13.
BMC Bioinformatics. 2012.
PMID: 23282026
Free PMC article.
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Therapeutic dose of green tea extract provokes liver damage and exacerbates paracetamol-induced hepatotoxicity in rats through oxidative stress and caspase 3-dependent apoptosis.
El-Bakry HA, El-Sherif G, Rostom RM.
El-Bakry HA, et al. Among authors: rostom rm.
Biomed Pharmacother. 2017 Dec;96:798-811. doi: 10.1016/j.biopha.2017.10.055. Epub 2017 Nov 6.
Biomed Pharmacother. 2017.
PMID: 29078257
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The white gene of Drosophila melanogaster encodes a protein with a role in courtship behavior.
Anaka M, MacDonald CD, Barkova E, Simon K, Rostom R, Godoy RA, Haigh AJ, Meinertzhagen IA, Lloyd V.
Anaka M, et al. Among authors: rostom r.
J Neurogenet. 2008;22(4):243-76. doi: 10.1080/01677060802309629.
J Neurogenet. 2008.
PMID: 19012054
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