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Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13.
Hall N, Pain A, Berriman M, Churcher C, Harris B, Harris D, Mungall K, Bowman S, Atkin R, Baker S, Barron A, Brooks K, Buckee CO, Burrows C, Cherevach I, Chillingworth C, Chillingworth T, Christodoulou Z, Clark L, Clark R, Corton C, Cronin A, Davies R, Davis P, Dear P, Dearden F, Doggett J, Feltwell T, Goble A, Goodhead I, Gwilliam R, Hamlin N, Hance Z, Harper D, Hauser H, Hornsby T, Holroyd S, Horrocks P, Humphray S, Jagels K, James KD, Johnson D, Kerhornou A, Knights A, Konfortov B, Kyes S, Larke N, Lawson D, Lennard N, Line A, Maddison M, McLean J, Mooney P, Moule S, Murphy L, Oliver K, Ormond D, Price C, Quail MA, Rabbinowitsch E, Rajandream MA, Rutter S, Rutherford KM, Sanders M, Simmonds M, Seeger K, Sharp S, Smith R, Squares R, Squares S, Stevens K, Taylor K, Tivey A, Unwin L, Whitehead S, Woodward J, Sulston JE, Craig A, Newbold C, Barrell BG. Hall N, et al. Among authors: berriman m. Nature. 2002 Oct 3;419(6906):527-31. doi: 10.1038/nature01095. Nature. 2002. PMID: 12368867
Curation of the Plasmodium falciparum genome.
Berry AE, Gardner MJ, Caspers GJ, Roos DS, Berriman M. Berry AE, et al. Among authors: berriman m. Trends Parasitol. 2004 Dec;20(12):548-52. doi: 10.1016/j.pt.2004.09.003. Trends Parasitol. 2004. PMID: 15522662 Review.
A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.
Hall N, Karras M, Raine JD, Carlton JM, Kooij TW, Berriman M, Florens L, Janssen CS, Pain A, Christophides GK, James K, Rutherford K, Harris B, Harris D, Churcher C, Quail MA, Ormond D, Doggett J, Trueman HE, Mendoza J, Bidwell SL, Rajandream MA, Carucci DJ, Yates JR 3rd, Kafatos FC, Janse CJ, Barrell B, Turner CM, Waters AP, Sinden RE. Hall N, et al. Among authors: berriman m. Science. 2005 Jan 7;307(5706):82-6. doi: 10.1126/science.1103717. Science. 2005. PMID: 15637271
Genome variation and evolution of the malaria parasite Plasmodium falciparum.
Jeffares DC, Pain A, Berry A, Cox AV, Stalker J, Ingle CE, Thomas A, Quail MA, Siebenthall K, Uhlemann AC, Kyes S, Krishna S, Newbold C, Dermitzakis ET, Berriman M. Jeffares DC, et al. Among authors: berriman m. Nat Genet. 2007 Jan;39(1):120-5. doi: 10.1038/ng1931. Epub 2006 Dec 10. Nat Genet. 2007. PMID: 17159978 Free PMC article.
The genome of the simian and human malaria parasite Plasmodium knowlesi.
Pain A, Böhme U, Berry AE, Mungall K, Finn RD, Jackson AP, Mourier T, Mistry J, Pasini EM, Aslett MA, Balasubrammaniam S, Borgwardt K, Brooks K, Carret C, Carver TJ, Cherevach I, Chillingworth T, Clark TG, Galinski MR, Hall N, Harper D, Harris D, Hauser H, Ivens A, Janssen CS, Keane T, Larke N, Lapp S, Marti M, Moule S, Meyer IM, Ormond D, Peters N, Sanders M, Sanders S, Sargeant TJ, Simmonds M, Smith F, Squares R, Thurston S, Tivey AR, Walker D, White B, Zuiderwijk E, Churcher C, Quail MA, Cowman AF, Turner CM, Rajandream MA, Kocken CH, Thomas AW, Newbold CI, Barrell BG, Berriman M. Pain A, et al. Among authors: berriman m. Nature. 2008 Oct 9;455(7214):799-803. doi: 10.1038/nature07306. Nature. 2008. PMID: 18843368 Free PMC article.
ABACAS: algorithm-based automatic contiguation of assembled sequences.
Assefa S, Keane TM, Otto TD, Newbold C, Berriman M. Assefa S, et al. Among authors: berriman m. Bioinformatics. 2009 Aug 1;25(15):1968-9. doi: 10.1093/bioinformatics/btp347. Epub 2009 Jun 3. Bioinformatics. 2009. PMID: 19497936 Free PMC article.
New insights into the blood-stage transcriptome of Plasmodium falciparum using RNA-Seq.
Otto TD, Wilinski D, Assefa S, Keane TM, Sarry LR, Böhme U, Lemieux J, Barrell B, Pain A, Berriman M, Newbold C, Llinás M. Otto TD, et al. Among authors: berriman m. Mol Microbiol. 2010 Apr;76(1):12-24. doi: 10.1111/j.1365-2958.2009.07026.x. Epub 2010 Feb 4. Mol Microbiol. 2010. PMID: 20141604 Free PMC article.
303 results