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Harmonization of quality metrics and power calculation in multi-omic studies.
Tarazona S, Balzano-Nogueira L, Gómez-Cabrero D, Schmidt A, Imhof A, Hankemeier T, Tegnér J, Westerhuis JA, Conesa A. Tarazona S, et al. Among authors: conesa a. Nat Commun. 2020 Jun 18;11(1):3092. doi: 10.1038/s41467-020-16937-8. Nat Commun. 2020. PMID: 32555183 Free PMC article.
Functional assessment of time course microarray data.
Nueda MJ, Sebastián P, Tarazona S, García-García F, Dopazo J, Ferrer A, Conesa A. Nueda MJ, et al. Among authors: conesa a. BMC Bioinformatics. 2009 Jun 16;10 Suppl 6(Suppl 6):S9. doi: 10.1186/1471-2105-10-S6-S9. BMC Bioinformatics. 2009. PMID: 19534758 Free PMC article.
Differential expression in RNA-seq: a matter of depth.
Tarazona S, García-Alcalde F, Dopazo J, Ferrer A, Conesa A. Tarazona S, et al. Among authors: conesa a. Genome Res. 2011 Dec;21(12):2213-23. doi: 10.1101/gr.124321.111. Epub 2011 Sep 8. Genome Res. 2011. PMID: 21903743 Free PMC article.
Qualimap: evaluating next-generation sequencing alignment data.
García-Alcalde F, Okonechnikov K, Carbonell J, Cruz LM, Götz S, Tarazona S, Dopazo J, Meyer TF, Conesa A. García-Alcalde F, et al. Among authors: conesa a. Bioinformatics. 2012 Oct 15;28(20):2678-9. doi: 10.1093/bioinformatics/bts503. Epub 2012 Aug 22. Bioinformatics. 2012. PMID: 22914218
Pathway network inference from gene expression data.
Ponzoni I, Nueda M, Tarazona S, Götz S, Montaner D, Dussaut J, Dopazo J, Conesa A. Ponzoni I, et al. Among authors: conesa a. BMC Syst Biol. 2014;8 Suppl 2(Suppl 2):S7. doi: 10.1186/1752-0509-8-S2-S7. Epub 2014 Mar 13. BMC Syst Biol. 2014. PMID: 25032889 Free PMC article.
Data integration in the era of omics: current and future challenges.
Gomez-Cabrero D, Abugessaisa I, Maier D, Teschendorff A, Merkenschlager M, Gisel A, Ballestar E, Bongcam-Rudloff E, Conesa A, Tegnér J. Gomez-Cabrero D, et al. Among authors: conesa a. BMC Syst Biol. 2014;8 Suppl 2(Suppl 2):I1. doi: 10.1186/1752-0509-8-S2-I1. Epub 2014 Mar 13. BMC Syst Biol. 2014. PMID: 25032990 Free PMC article. Review.
240 results