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Profiling immunoglobulin repertoires across multiple human tissues using RNA sequencing.
Mandric I, Rotman J, Yang HT, Strauli N, Montoya DJ, Van Der Wey W, Ronas JR, Statz B, Yao D, Petrova V, Zelikovsky A, Spreafico R, Shifman S, Zaitlen N, Rossetti M, Ansel KM, Eskin E, Mangul S. Mandric I, et al. Among authors: yao d. Nat Commun. 2020 Jun 19;11(1):3126. doi: 10.1038/s41467-020-16857-7. Nat Commun. 2020. PMID: 32561710 Free PMC article.
Benchmarking of computational error-correction methods for next-generation sequencing data.
Mitchell K, Brito JJ, Mandric I, Wu Q, Knyazev S, Chang S, Martin LS, Karlsberg A, Gerasimov E, Littman R, Hill BL, Wu NC, Yang HT, Hsieh K, Chen L, Littman E, Shabani T, Enik G, Yao D, Sun R, Schroeder J, Eskin E, Zelikovsky A, Skums P, Pop M, Mangul S. Mitchell K, et al. Among authors: yao d. Genome Biol. 2020 Mar 17;21(1):71. doi: 10.1186/s13059-020-01988-3. Genome Biol. 2020. PMID: 32183840 Free PMC article.
Author Correction: Profiling immunoglobulin repertoires across multiple human tissues using RNA sequencing.
Mandric I, Rotman J, Yang HT, Strauli N, Montoya DJ, Van Der Wey W, Ronas JR, Statz B, Yao D, Petrova V, Zelikovsky A, Spreafico R, Shifman S, Zaitlen N, Rossetti M, Ansel KM, Eskin E, Mangul S. Mandric I, et al. Among authors: yao d. Nat Commun. 2020 Sep 4;11(1):4499. doi: 10.1038/s41467-020-18509-2. Nat Commun. 2020. PMID: 32887888 Free PMC article.
Scalable genetic screening for regulatory circuits using compressed Perturb-seq.
Yao D, Binan L, Bezney J, Simonton B, Freedman J, Frangieh CJ, Dey K, Geiger-Schuller K, Eraslan B, Gusev A, Regev A, Cleary B. Yao D, et al. Nat Biotechnol. 2023 Oct 23:10.1038/s41587-023-01964-9. doi: 10.1038/s41587-023-01964-9. Online ahead of print. Nat Biotechnol. 2023. PMID: 37872410
FOXO1 regulates RUNX2 ubiquitination through SMURF2 in calcific aortic valve disease.
Jiang C, Yao D, Liu Z, Zheng Y, Chen M, Yim WY, Zheng Q, Zhang T, Fan L, Fan Z, Geng B, Tian R, Zhou T, Qiao W, Shi J, Li F, Xu L, Huang Y, Dong N. Jiang C, et al. Among authors: yao d. Redox Biol. 2024 May 27;73:103215. doi: 10.1016/j.redox.2024.103215. Online ahead of print. Redox Biol. 2024. PMID: 38810422 Free article.
3,086 results