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cyvcf2: fast, flexible variant analysis with Python.
Pedersen BS, Quinlan AR. Pedersen BS, et al. Bioinformatics. 2017 Jun 15;33(12):1867-1869. doi: 10.1093/bioinformatics/btx057. Bioinformatics. 2017. PMID: 28165109 Free PMC article.
hts-nim: scripting high-performance genomic analyses.
Pedersen BS, Quinlan AR. Pedersen BS, et al. Bioinformatics. 2018 Oct 1;34(19):3387-3389. doi: 10.1093/bioinformatics/bty358. Bioinformatics. 2018. PMID: 29718142 Free PMC article.
GIGGLE: a search engine for large-scale integrated genome analysis.
Layer RM, Pedersen BS, DiSera T, Marth GT, Gertz J, Quinlan AR. Layer RM, et al. Among authors: pedersen bs. Nat Methods. 2018 Feb;15(2):123-126. doi: 10.1038/nmeth.4556. Epub 2018 Jan 8. Nat Methods. 2018. PMID: 29309061 Free PMC article.
103 results