Sander C - Search Results

1

Perturbation biology links temporal protein changes to drug responses in a melanoma cell line.

Nyman E, Stein RR, Jing X, Wang W, Marks B, Zervantonakis IK, Korkut A, Gauthier NP, Sander C. Nyman E, et al. Among authors: sander c. PLoS Comput Biol. 2020 Jul 15;16(7):e1007909. doi: 10.1371/journal.pcbi.1007909. eCollection 2020 Jul. PLoS Comput Biol. 2020. PMID: 32667922 Free PMC article.

2

Models from experiments: combinatorial drug perturbations of cancer cells.

Nelander S, Wang W, Nilsson B, She QB, Pratilas C, Rosen N, Gennemark P, Sander C. Nelander S, et al. Among authors: sander c. Mol Syst Biol. 2008;4:216. doi: 10.1038/msb.2008.53. Epub 2008 Sep 2. Mol Syst Biol. 2008. PMID: 18766176 Free PMC article.

3

Off-target effects dominate a large-scale RNAi screen for modulators of the TGF-β pathway and reveal microRNA regulation of TGFBR2.

Schultz N, Marenstein DR, De Angelis DA, Wang WQ, Nelander S, Jacobsen A, Marks DS, Massagué J, Sander C. Schultz N, et al. Among authors: sander c. Silence. 2011 Mar 14;2:3. doi: 10.1186/1758-907X-2-3. Silence. 2011. PMID: 21401928 Free PMC article.

4

PiHelper: an open source framework for drug-target and antibody-target data.

Aksoy BA, Gao J, Dresdner G, Wang W, Root A, Jing X, Cerami E, Sander C. Aksoy BA, et al. Among authors: sander c. Bioinformatics. 2013 Aug 15;29(16):2071-2. doi: 10.1093/bioinformatics/btt345. Epub 2013 Jun 12. Bioinformatics. 2013. PMID: 23766416 Free PMC article.

5

Cell-selective labeling using amino acid precursors for proteomic studies of multicellular environments.

Gauthier NP, Soufi B, Walkowicz WE, Pedicord VA, Mavrakis KJ, Macek B, Gin DY, Sander C, Miller ML. Gauthier NP, et al. Among authors: sander c. Nat Methods. 2013 Aug;10(8):768-73. doi: 10.1038/nmeth.2529. Epub 2013 Jun 30. Nat Methods. 2013. PMID: 23817070 Free PMC article.

6

Drug synergy screen and network modeling in dedifferentiated liposarcoma identifies CDK4 and IGF1R as synergistic drug targets.

Miller ML, Molinelli EJ, Nair JS, Sheikh T, Samy R, Jing X, He Q, Korkut A, Crago AM, Singer S, Schwartz GK, Sander C. Miller ML, et al. Among authors: sander c. Sci Signal. 2013 Sep 24;6(294):ra85. doi: 10.1126/scisignal.2004014. Sci Signal. 2013. PMID: 24065146 Free PMC article.

7

Ecological modeling from time-series inference: insight into dynamics and stability of intestinal microbiota.

Stein RR, Bucci V, Toussaint NC, Buffie CG, Rätsch G, Pamer EG, Sander C, Xavier JB. Stein RR, et al. Among authors: sander c. PLoS Comput Biol. 2013;9(12):e1003388. doi: 10.1371/journal.pcbi.1003388. Epub 2013 Dec 12. PLoS Comput Biol. 2013. PMID: 24348232 Free PMC article.

8

Perturbation biology: inferring signaling networks in cellular systems.

Molinelli EJ, Korkut A, Wang W, Miller ML, Gauthier NP, Jing X, Kaushik P, He Q, Mills G, Solit DB, Pratilas CA, Weigt M, Braunstein A, Pagnani A, Zecchina R, Sander C. Molinelli EJ, et al. Among authors: sander c. PLoS Comput Biol. 2013;9(12):e1003290. doi: 10.1371/journal.pcbi.1003290. Epub 2013 Dec 19. PLoS Comput Biol. 2013. PMID: 24367245 Free PMC article.

9

Prediction of individualized therapeutic vulnerabilities in cancer from genomic profiles.

Aksoy BA, Demir E, Babur Ö, Wang W, Jing X, Schultz N, Sander C. Aksoy BA, et al. Among authors: sander c. Bioinformatics. 2014 Jul 15;30(14):2051-9. doi: 10.1093/bioinformatics/btu164. Epub 2014 Mar 24. Bioinformatics. 2014. PMID: 24665131 Free PMC article.

10

Precision microbiome reconstitution restores bile acid mediated resistance to Clostridium difficile.

Buffie CG, Bucci V, Stein RR, McKenney PT, Ling L, Gobourne A, No D, Liu H, Kinnebrew M, Viale A, Littmann E, van den Brink MR, Jenq RR, Taur Y, Sander C, Cross JR, Toussaint NC, Xavier JB, Pamer EG. Buffie CG, et al. Among authors: sander c. Nature. 2015 Jan 8;517(7533):205-8. doi: 10.1038/nature13828. Epub 2014 Oct 22. Nature. 2015. PMID: 25337874 Free PMC article.

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