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3D mapping and accelerated super-resolution imaging of the human genome using in situ sequencing.
Nat Methods. 2020 Aug;17(8):822-832. doi: 10.1038/s41592-020-0890-0. Epub 2020 Jul 27.
Nat Methods. 2020.
PMID: 32719531
Free PMC article.
In situ genome sequencing resolves DNA sequence and structure in intact biological samples.
Payne AC, Chiang ZD, Reginato PL, Mangiameli SM, Murray EM, Yao CC, Markoulaki S, Earl AS, Labade AS, Jaenisch R, Church GM, Boyden ES, Buenrostro JD, Chen F.
Payne AC, et al. Among authors: reginato pl.
Science. 2021 Feb 26;371(6532):eaay3446. doi: 10.1126/science.aay3446. Epub 2020 Dec 31.
Science. 2021.
PMID: 33384301
Free PMC article.
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Expansion sequencing: Spatially precise in situ transcriptomics in intact biological systems.
Alon S, Goodwin DR, Sinha A, Wassie AT, Chen F, Daugharthy ER, Bando Y, Kajita A, Xue AG, Marrett K, Prior R, Cui Y, Payne AC, Yao CC, Suk HJ, Wang R, Yu CJ, Tillberg P, Reginato P, Pak N, Liu S, Punthambaker S, Iyer EPR, Kohman RE, Miller JA, Lein ES, Lako A, Cullen N, Rodig S, Helvie K, Abravanel DL, Wagle N, Johnson BE, Klughammer J, Slyper M, Waldman J, Jané-Valbuena J, Rozenblatt-Rosen O, Regev A; IMAXT Consortium; Church GM, Marblestone AH, Boyden ES.
Alon S, et al.
Science. 2021 Jan 29;371(6528):eaax2656. doi: 10.1126/science.aax2656.
Science. 2021.
PMID: 33509999
Free PMC article.
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Expansion microscopy of zebrafish for neuroscience and developmental biology studies.
Freifeld L, Odstrcil I, Förster D, Ramirez A, Gagnon JA, Randlett O, Costa EK, Asano S, Celiker OT, Gao R, Martin-Alarcon DA, Reginato P, Dick C, Chen L, Schoppik D, Engert F, Baier H, Boyden ES.
Freifeld L, et al.
Proc Natl Acad Sci U S A. 2017 Dec 12;114(50):E10799-E10808. doi: 10.1073/pnas.1706281114. Epub 2017 Nov 21.
Proc Natl Acad Sci U S A. 2017.
PMID: 29162696
Free PMC article.
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