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Interactome Mapping Provides a Network of Neurodegenerative Disease Proteins and Uncovers Widespread Protein Aggregation in Affected Brains.
Haenig C, Atias N, Taylor AK, Mazza A, Schaefer MH, Russ J, Riechers SP, Jain S, Coughlin M, Fontaine JF, Freibaum BD, Brusendorf L, Zenkner M, Porras P, Stroedicke M, Schnoegl S, Arnsburg K, Boeddrich A, Pigazzini L, Heutink P, Taylor JP, Kirstein J, Andrade-Navarro MA, Sharan R, Wanker EE. Haenig C, et al. Among authors: porras p. Cell Rep. 2020 Aug 18;32(7):108050. doi: 10.1016/j.celrep.2020.108050. Cell Rep. 2020. PMID: 32814053 Free article.
Detection of alpha-rod protein repeats using a neural network and application to huntingtin.
Palidwor GA, Shcherbinin S, Huska MR, Rasko T, Stelzl U, Arumughan A, Foulle R, Porras P, Sanchez-Pulido L, Wanker EE, Andrade-Navarro MA. Palidwor GA, et al. Among authors: porras p. PLoS Comput Biol. 2009 Mar;5(3):e1000304. doi: 10.1371/journal.pcbi.1000304. Epub 2009 Mar 13. PLoS Comput Biol. 2009. PMID: 19282972 Free PMC article.
Development and application of a DNA microarray-based yeast two-hybrid system.
Suter B, Fontaine JF, Yildirimman R, Raskó T, Schaefer MH, Rasche A, Porras P, Vázquez-Álvarez BM, Russ J, Rau K, Foulle R, Zenkner M, Saar K, Herwig R, Andrade-Navarro MA, Wanker EE. Suter B, et al. Among authors: porras p. Nucleic Acids Res. 2013 Feb 1;41(3):1496-507. doi: 10.1093/nar/gks1329. Epub 2012 Dec 28. Nucleic Acids Res. 2013. PMID: 23275563 Free PMC article.
DCAF8, a novel MuRF1 interaction partner, promotes muscle atrophy.
Nowak M, Suenkel B, Porras P, Migotti R, Schmidt F, Kny M, Zhu X, Wanker EE, Dittmar G, Fielitz J, Sommer T. Nowak M, et al. Among authors: porras p. J Cell Sci. 2019 Sep 6;132(17):jcs233395. doi: 10.1242/jcs.233395. J Cell Sci. 2019. PMID: 31391242
Analyzing protein-protein interaction networks.
Koh GC, Porras P, Aranda B, Hermjakob H, Orchard SE. Koh GC, et al. Among authors: porras p. J Proteome Res. 2012 Apr 6;11(4):2014-31. doi: 10.1021/pr201211w. Epub 2012 Mar 2. J Proteome Res. 2012. PMID: 22385417 Review.
The IntAct database: efficient access to fine-grained molecular interaction data.
Del Toro N, Shrivastava A, Ragueneau E, Meldal B, Combe C, Barrera E, Perfetto L, How K, Ratan P, Shirodkar G, Lu O, Mészáros B, Watkins X, Pundir S, Licata L, Iannuccelli M, Pellegrini M, Martin MJ, Panni S, Duesbury M, Vallet SD, Rappsilber J, Ricard-Blum S, Cesareni G, Salwinski L, Orchard S, Porras P, Panneerselvam K, Hermjakob H. Del Toro N, et al. Among authors: porras p. Nucleic Acids Res. 2022 Jan 7;50(D1):D648-D653. doi: 10.1093/nar/gkab1006. Nucleic Acids Res. 2022. PMID: 34761267 Free PMC article.
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