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NuSeT: A deep learning tool for reliably separating and analyzing crowded cells.
Yang L, Ghosh RP, Franklin JM, Chen S, You C, Narayan RR, Melcher ML, Liphardt JT. Yang L, et al. Among authors: liphardt jt. PLoS Comput Biol. 2020 Sep 14;16(9):e1008193. doi: 10.1371/journal.pcbi.1008193. eCollection 2020 Sep. PLoS Comput Biol. 2020. PMID: 32925919 Free PMC article.
A fluorogenic array for temporally unlimited single-molecule tracking.
Ghosh RP, Franklin JM, Draper WE, Shi Q, Beltran B, Spakowitz AJ, Liphardt JT. Ghosh RP, et al. Among authors: liphardt jt. Nat Chem Biol. 2019 Apr;15(4):401-409. doi: 10.1038/s41589-019-0241-6. Epub 2019 Mar 11. Nat Chem Biol. 2019. PMID: 30858596
ATAC-see reveals the accessible genome by transposase-mediated imaging and sequencing.
Chen X, Shen Y, Draper W, Buenrostro JD, Litzenburger U, Cho SW, Satpathy AT, Carter AC, Ghosh RP, East-Seletsky A, Doudna JA, Greenleaf WJ, Liphardt JT, Chang HY. Chen X, et al. Among authors: liphardt jt. Nat Methods. 2016 Dec;13(12):1013-1020. doi: 10.1038/nmeth.4031. Epub 2016 Oct 17. Nat Methods. 2016. PMID: 27749837 Free PMC article.
Strong triaxial coupling and anomalous Poisson effect in collagen networks.
Ban E, Wang H, Franklin JM, Liphardt JT, Janmey PA, Shenoy VB. Ban E, et al. Among authors: liphardt jt. Proc Natl Acad Sci U S A. 2019 Apr 2;116(14):6790-6799. doi: 10.1073/pnas.1815659116. Epub 2019 Mar 20. Proc Natl Acad Sci U S A. 2019. PMID: 30894480 Free PMC article.
Optical control of fast and processive engineered myosins in vitro and in living cells.
Ruijgrok PV, Ghosh RP, Zemsky S, Nakamura M, Gong R, Ning L, Chen R, Vachharajani VT, Chu AE, Anand N, Eguchi RR, Huang PS, Lin MZ, Alushin GM, Liphardt JT, Bryant Z. Ruijgrok PV, et al. Among authors: liphardt jt. Nat Chem Biol. 2021 May;17(5):540-548. doi: 10.1038/s41589-021-00740-7. Epub 2021 Feb 18. Nat Chem Biol. 2021. PMID: 33603247 Free PMC article.
A Mutation in Histone H2B Represents a New Class of Oncogenic Driver.
Bennett RL, Bele A, Small EC, Will CM, Nabet B, Oyer JA, Huang X, Ghosh RP, Grzybowski AT, Yu T, Zhang Q, Riva A, Lele TP, Schatz GC, Kelleher NL, Ruthenburg AJ, Liphardt J, Licht JD. Bennett RL, et al. Cancer Discov. 2019 Oct;9(10):1438-1451. doi: 10.1158/2159-8290.CD-19-0393. Epub 2019 Jul 23. Cancer Discov. 2019. PMID: 31337617 Free PMC article.
48 results