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Diversity and Distribution of a Novel Genus of Hyperthermophilic Aquificae Viruses Encoding a Proof-Reading Family-A DNA Polymerase.
Palmer M, Hedlund BP, Roux S, Tsourkas PK, Doss RK, Stamereilers C, Mehta A, Dodsworth JA, Lodes M, Monsma S, Glavina Del Rio T, Schoenfeld TW, Eloe-Fadrosh EA, Mead DA. Palmer M, et al. Among authors: roux s. Front Microbiol. 2020 Nov 12;11:583361. doi: 10.3389/fmicb.2020.583361. eCollection 2020. Front Microbiol. 2020. PMID: 33281778 Free PMC article.
Genomic variation and biogeography of Antarctic haloarchaea.
Tschitschko B, Erdmann S, DeMaere MZ, Roux S, Panwar P, Allen MA, Williams TJ, Brazendale S, Hancock AM, Eloe-Fadrosh EA, Cavicchioli R. Tschitschko B, et al. Among authors: roux s. Microbiome. 2018 Jun 20;6(1):113. doi: 10.1186/s40168-018-0495-3. Microbiome. 2018. PMID: 29925429 Free PMC article.
Optimizing de novo genome assembly from PCR-amplified metagenomes.
Roux S, Trubl G, Goudeau D, Nath N, Couradeau E, Ahlgren NA, Zhan Y, Marsan D, Chen F, Fuhrman JA, Northen TR, Sullivan MB, Rich VI, Malmstrom RR, Eloe-Fadrosh EA. Roux S, et al. PeerJ. 2019 May 9;7:e6902. doi: 10.7717/peerj.6902. eCollection 2019. PeerJ. 2019. PMID: 31119088 Free PMC article.
Microbial metagenomes and metatranscriptomes during a coastal phytoplankton bloom.
Nowinski B, Smith CB, Thomas CM, Esson K, Marin R 3rd, Preston CM, Birch JM, Scholin CA, Huntemann M, Clum A, Foster B, Foster B, Roux S, Palaniappan K, Varghese N, Mukherjee S, Reddy TBK, Daum C, Copeland A, Chen IA, Ivanova NN, Kyrpides NC, Glavina Del Rio T, Whitman WB, Kiene RP, Eloe-Fadrosh EA, Moran MA. Nowinski B, et al. Among authors: roux s. Sci Data. 2019 Jul 22;6(1):129. doi: 10.1038/s41597-019-0132-4. Sci Data. 2019. PMID: 31332186 Free PMC article.
Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth's biomes.
Roux S, Krupovic M, Daly RA, Borges AL, Nayfach S, Schulz F, Sharrar A, Matheus Carnevali PB, Cheng JF, Ivanova NN, Bondy-Denomy J, Wrighton KC, Woyke T, Visel A, Kyrpides NC, Eloe-Fadrosh EA. Roux S, et al. Nat Microbiol. 2019 Nov;4(11):1895-1906. doi: 10.1038/s41564-019-0510-x. Epub 2019 Jul 22. Nat Microbiol. 2019. PMID: 31332386 Free PMC article.
Metatranscriptomic Sequencing of a Cyanobacterial Soil-Surface Consortium with and without a Diverse Underlying Soil Microbiome.
Bell TH, Trexler RV, Peng X, Huntemann M, Clum A, Foster B, Foster B, Roux S, Palaniappan K, Varghese N, Mukherjee S, Reddy TBK, Daum C, Copeland A, Ivanova NN, Kyrpides NC, Pennacchio C, Eloe-Fadrosh EA, Bruns MA. Bell TH, et al. Among authors: roux s. Microbiol Resour Announc. 2020 Jan 2;9(1):e01361-19. doi: 10.1128/MRA.01361-19. Microbiol Resour Announc. 2020. PMID: 31896648 Free PMC article.
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