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Phylogeny and classification of Odonata using targeted genomics.
Bybee SM, Kalkman VJ, Erickson RJ, Frandsen PB, Breinholt JW, Suvorov A, Dijkstra KB, Cordero-Rivera A, Skevington JH, Abbott JC, Sanchez Herrera M, Lemmon AR, Moriarty Lemmon E, Ware JL. Bybee SM, et al. Among authors: breinholt jw. Mol Phylogenet Evol. 2021 Jul;160:107115. doi: 10.1016/j.ympev.2021.107115. Epub 2021 Feb 18. Mol Phylogenet Evol. 2021. PMID: 33609713 Free article.
Using phylogenetically-informed annotation (PIA) to search for light-interacting genes in transcriptomes from non-model organisms.
Speiser DI, Pankey MS, Zaharoff AK, Battelle BA, Bracken-Grissom HD, Breinholt JW, Bybee SM, Cronin TW, Garm A, Lindgren AR, Patel NH, Porter ML, Protas ME, Rivera AS, Serb JM, Zigler KS, Crandall KA, Oakley TH. Speiser DI, et al. Among authors: breinholt jw. BMC Bioinformatics. 2014 Nov 19;15(1):350. doi: 10.1186/s12859-014-0350-x. BMC Bioinformatics. 2014. PMID: 25407802 Free PMC article.
Underground evolution: new roots for the old tree of lumbricid earthworms.
Domínguez J, Aira M, Breinholt JW, Stojanovic M, James SW, Pérez-Losada M. Domínguez J, et al. Among authors: breinholt jw. Mol Phylogenet Evol. 2015 Feb;83:7-19. doi: 10.1016/j.ympev.2014.10.024. Epub 2014 Nov 15. Mol Phylogenet Evol. 2015. PMID: 25463017 Free PMC article.
Four hundred shades of brown: Higher level phylogeny of the problematic Euptychiina (Lepidoptera, Nymphalidae, Satyrinae) based on hybrid enrichment data.
Espeland M, Breinholt JW, Barbosa EP, Casagrande MM, Huertas B, Lamas G, Marín MA, Mielke OHH, Miller JY, Nakahara S, Tan D, Warren AD, Zacca T, Kawahara AY, Freitas AVL, Willmott KR. Espeland M, et al. Among authors: breinholt jw. Mol Phylogenet Evol. 2019 Feb;131:116-124. doi: 10.1016/j.ympev.2018.10.039. Epub 2018 Nov 10. Mol Phylogenet Evol. 2019. PMID: 30423438
41 results