Shen Y - Search Results

1

Integrative Analysis of Genome, 3D Genome, and Transcriptome Alterations of Clinical Lung Cancer Samples.

Li T, Li R, Dong X, Shi L, Lin M, Peng T, Wu P, Liu Y, Li X, He X, Han X, Kang B, Wang Y, Liu Z, Chen Q, Shen Y, Feng M, Wang X, Wu D, Wang J, Li C. Li T, et al. Among authors: shen y. Genomics Proteomics Bioinformatics. 2021 Oct;19(5):741-753. doi: 10.1016/j.gpb.2020.05.007. Epub 2021 Jun 8. Genomics Proteomics Bioinformatics. 2021. PMID: 34116262 Free PMC article.

2

Genome Writing: Current Progress and Related Applications.

Wang Y, Shen Y, Gu Y, Zhu S, Yin Y. Wang Y, et al. Among authors: shen y. Genomics Proteomics Bioinformatics. 2018 Feb;16(1):10-16. doi: 10.1016/j.gpb.2018.02.001. Epub 2018 Feb 21. Genomics Proteomics Bioinformatics. 2018. PMID: 29474887 Free PMC article. Review.

3

Genomic sequencing and editing revealed the GRM8 signaling pathway as potential therapeutic targets of squamous cell lung cancer.

Zhang P, Kang B, Xie G, Li S, Gu Y, Shen Y, Zhao X, Ma Y, Li F, Si J, Wang J, Chen J, Yang H, Xu X, Yang Y. Zhang P, et al. Among authors: shen y. Cancer Lett. 2019 Feb 1;442:53-67. doi: 10.1016/j.canlet.2018.10.035. Epub 2018 Oct 27. Cancer Lett. 2019. PMID: 30391781 Free article.

4

CRISPR-mediated MECOM depletion retards tumor growth by reducing cancer stem cell properties in lung squamous cell carcinoma.

Ma Y, Kang B, Li S, Xie G, Bi J, Li F, An G, Liu B, Li J, Shen Y, Xu X, Yang H, Yang Y, Gu Y, Wu N. Ma Y, et al. Among authors: shen y. Mol Ther. 2022 Nov 2;30(11):3341-3357. doi: 10.1016/j.ymthe.2022.06.011. Epub 2022 Jun 22. Mol Ther. 2022. PMID: 35733338 Free PMC article.

5

Oil accumulation mechanisms of the oleaginous microalga Chlorella protothecoides revealed through its genome, transcriptomes, and proteomes.

Gao C, Wang Y, Shen Y, Yan D, He X, Dai J, Wu Q. Gao C, et al. Among authors: shen y. BMC Genomics. 2014 Jul 10;15(1):582. doi: 10.1186/1471-2164-15-582. BMC Genomics. 2014. PMID: 25012212 Free PMC article.

6

SCRaMbLE generates designed combinatorial stochastic diversity in synthetic chromosomes.

Shen Y, Stracquadanio G, Wang Y, Yang K, Mitchell LA, Xue Y, Cai Y, Chen T, Dymond JS, Kang K, Gong J, Zeng X, Zhang Y, Li Y, Feng Q, Xu X, Wang J, Wang J, Yang H, Boeke JD, Bader JS. Shen Y, et al. Genome Res. 2016 Jan;26(1):36-49. doi: 10.1101/gr.193433.115. Epub 2015 Nov 13. Genome Res. 2016. PMID: 26566658 Free PMC article.

7

Sequencing and comparative analysis of three Chlorella genomes provide insights into strain-specific adaptation to wastewater.

Wu T, Li L, Jiang X, Yang Y, Song Y, Chen L, Xu X, Shen Y, Gu Y. Wu T, et al. Among authors: shen y. Sci Rep. 2019 Jul 2;9(1):9514. doi: 10.1038/s41598-019-45511-6. Sci Rep. 2019. PMID: 31267025 Free PMC article.

8

Dissecting aneuploidy phenotypes by constructing Sc2.0 chromosome VII and SCRaMbLEing synthetic disomic yeast.

Shen Y, Gao F, Wang Y, Wang Y, Zheng J, Gong J, Zhang J, Luo Z, Schindler D, Deng Y, Ding W, Lin T, Swidah R, Zhao H, Jiang S, Zeng C, Chen S, Chen T, Wang Y, Luo Y, Mitchell L, Bader JS, Zhang G, Shen X, Wang J, Fu X, Dai J, Boeke JD, Yang H, Xu X, Cai Y. Shen Y, et al. Among authors: shen x. Cell Genom. 2023 Nov 9;3(11):100364. doi: 10.1016/j.xgen.2023.100364. eCollection 2023 Nov 8. Cell Genom. 2023. PMID: 38020968 Free PMC article.

9

BDdb: a comprehensive platform for exploration and utilization of birth defect multi-omics data.

Zhang D, Zhou S, Zhou Z, Jiang X, Chen D, Sun HX, Huang J, Qu S, Yang S, Gu Y, Zhang X, Jin X, Gao Y, Shen Y, Chen F. Zhang D, et al. Among authors: shen y. BMC Med Genomics. 2021 Nov 4;14(1):260. doi: 10.1186/s12920-021-01110-x. BMC Med Genomics. 2021. PMID: 34736471 Free PMC article.

10

3D organization of synthetic and scrambled chromosomes.

Mercy G, Mozziconacci J, Scolari VF, Yang K, Zhao G, Thierry A, Luo Y, Mitchell LA, Shen M, Shen Y, Walker R, Zhang W, Wu Y, Xie ZX, Luo Z, Cai Y, Dai J, Yang H, Yuan YJ, Boeke JD, Bader JS, Muller H, Koszul R. Mercy G, et al. Among authors: shen y, shen m. Science. 2017 Mar 10;355(6329):eaaf4597. doi: 10.1126/science.aaf4597. Science. 2017. PMID: 28280150 Free PMC article.

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