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QSIPrep: an integrative platform for preprocessing and reconstructing diffusion MRI data.
Cieslak M, Cook PA, He X, Yeh FC, Dhollander T, Adebimpe A, Aguirre GK, Bassett DS, Betzel RF, Bourque J, Cabral LM, Davatzikos C, Detre JA, Earl E, Elliott MA, Fadnavis S, Fair DA, Foran W, Fotiadis P, Garyfallidis E, Giesbrecht B, Gur RC, Gur RE, Kelz MB, Keshavan A, Larsen BS, Luna B, Mackey AP, Milham MP, Oathes DJ, Perrone A, Pines AR, Roalf DR, Richie-Halford A, Rokem A, Sydnor VJ, Tapera TM, Tooley UA, Vettel JM, Yeatman JD, Grafton ST, Satterthwaite TD. Cieslak M, et al. Among authors: tapera tm. Nat Methods. 2021 Jul;18(7):775-778. doi: 10.1038/s41592-021-01185-5. Epub 2021 Jun 21. Nat Methods. 2021. PMID: 34155395 Free PMC article.
ASLPrep: a platform for processing of arterial spin labeled MRI and quantification of regional brain perfusion.
Adebimpe A, Bertolero M, Dolui S, Cieslak M, Murtha K, Baller EB, Boeve B, Boxer A, Butler ER, Cook P, Colcombe S, Covitz S, Davatzikos C, Davila DG, Elliott MA, Flounders MW, Franco AR, Gur RE, Gur RC, Jaber B, McMillian C; ALLFTD Consortium; Milham M, Mutsaerts HJMM, Oathes DJ, Olm CA, Phillips JS, Tackett W, Roalf DR, Rosen H, Tapera TM, Tisdall MD, Zhou D, Esteban O, Poldrack RA, Detre JA, Satterthwaite TD. Adebimpe A, et al. Among authors: tapera tm. Nat Methods. 2022 Jun;19(6):683-686. doi: 10.1038/s41592-022-01458-7. Epub 2022 Jun 10. Nat Methods. 2022. PMID: 35689029 Free PMC article.
Developmental coupling of cerebral blood flow and fMRI fluctuations in youth.
Baller EB, Valcarcel AM, Adebimpe A, Alexander-Bloch A, Cui Z, Gur RC, Gur RE, Larsen BL, Linn KA, O'Donnell CM, Pines AR, Raznahan A, Roalf DR, Sydnor VJ, Tapera TM, Tisdall MD, Vandekar S, Xia CH, Detre JA, Shinohara RT, Satterthwaite TD. Baller EB, et al. Among authors: tapera tm. Cell Rep. 2022 Mar 29;38(13):110576. doi: 10.1016/j.celrep.2022.110576. Cell Rep. 2022. PMID: 35354053 Free PMC article.
Curation of BIDS (CuBIDS): A workflow and software package for streamlining reproducible curation of large BIDS datasets.
Covitz S, Tapera TM, Adebimpe A, Alexander-Bloch AF, Bertolero MA, Feczko E, Franco AR, Gur RE, Gur RC, Hendrickson T, Houghton A, Mehta K, Murtha K, Perrone AJ, Robert-Fitzgerald T, Schabdach JM, Shinohara RT, Vogel JW, Zhao C, Fair DA, Milham MP, Cieslak M, Satterthwaite TD. Covitz S, et al. Among authors: tapera tm. Neuroimage. 2022 Nov;263:119609. doi: 10.1016/j.neuroimage.2022.119609. Epub 2022 Sep 3. Neuroimage. 2022. PMID: 36064140 Free PMC article.
FlywheelTools: Data Curation and Manipulation on the Flywheel Platform.
Tapera TM, Cieslak M, Bertolero M, Adebimpe A, Aguirre GK, Butler ER, Cook PA, Davila D, Elliott MA, Linguiti S, Murtha K, Tackett W, Detre JA, Satterthwaite TD. Tapera TM, et al. Front Neuroinform. 2021 Jun 22;15:678403. doi: 10.3389/fninf.2021.678403. eCollection 2021. Front Neuroinform. 2021. PMID: 34239433 Free PMC article.
A simple permutation-based test of intermodal correspondence.
Weinstein SM, Vandekar SN, Adebimpe A, Tapera TM, Robert-Fitzgerald T, Gur RC, Gur RE, Raznahan A, Satterthwaite TD, Alexander-Bloch AF, Shinohara RT. Weinstein SM, et al. Among authors: tapera tm. Hum Brain Mapp. 2021 Nov;42(16):5175-5187. doi: 10.1002/hbm.25577. Epub 2021 Sep 14. Hum Brain Mapp. 2021. PMID: 34519385 Free PMC article.
Mobile footprinting: linking individual distinctiveness in mobility patterns to mood, sleep, and brain functional connectivity.
Xia CH, Barnett I, Tapera TM, Adebimpe A, Baker JT, Bassett DS, Brotman MA, Calkins ME, Cui Z, Leibenluft E, Linguiti S, Lydon-Staley DM, Martin ML, Moore TM, Murtha K, Piiwaa K, Pines A, Roalf DR, Rush-Goebel S, Wolf DH, Ungar LH, Satterthwaite TD. Xia CH, et al. Among authors: tapera tm. Neuropsychopharmacology. 2022 Aug;47(9):1662-1671. doi: 10.1038/s41386-022-01351-z. Epub 2022 Jun 3. Neuropsychopharmacology. 2022. PMID: 35660803 Free PMC article.
16 results