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Dissecting plant genomes with the PLAZA comparative genomics platform.
Van Bel M, Proost S, Wischnitzki E, Movahedi S, Scheerlinck C, Van de Peer Y, Vandepoele K. Van Bel M, et al. Among authors: vandepoele k. Plant Physiol. 2012 Feb;158(2):590-600. doi: 10.1104/pp.111.189514. Epub 2011 Dec 23. Plant Physiol. 2012. PMID: 22198273 Free PMC article.
Comparative co-expression analysis in plant biology.
Movahedi S, Van Bel M, Heyndrickx KS, Vandepoele K. Movahedi S, et al. Among authors: vandepoele k. Plant Cell Environ. 2012 Oct;35(10):1787-98. doi: 10.1111/j.1365-3040.2012.02517.x. Epub 2012 May 10. Plant Cell Environ. 2012. PMID: 22489681 Free article. Review.
pico-PLAZA, a genome database of microbial photosynthetic eukaryotes.
Vandepoele K, Van Bel M, Richard G, Van Landeghem S, Verhelst B, Moreau H, Van de Peer Y, Grimsley N, Piganeau G. Vandepoele K, et al. Environ Microbiol. 2013 Aug;15(8):2147-53. doi: 10.1111/1462-2920.12174. Epub 2013 Jul 4. Environ Microbiol. 2013. PMID: 23826978
Big data and other challenges in the quest for orthologs.
Sonnhammer EL, Gabaldón T, Sousa da Silva AW, Martin M, Robinson-Rechavi M, Boeckmann B, Thomas PD, Dessimoz C; Quest for Orthologs consortium. Sonnhammer EL, et al. Bioinformatics. 2014 Nov 1;30(21):2993-8. doi: 10.1093/bioinformatics/btu492. Epub 2014 Jul 26. Bioinformatics. 2014. PMID: 25064571 Free PMC article.
PLAZA 3.0: an access point for plant comparative genomics.
Proost S, Van Bel M, Vaneechoutte D, Van de Peer Y, Inzé D, Mueller-Roeber B, Vandepoele K. Proost S, et al. Among authors: vandepoele k. Nucleic Acids Res. 2015 Jan;43(Database issue):D974-81. doi: 10.1093/nar/gku986. Epub 2014 Oct 16. Nucleic Acids Res. 2015. PMID: 25324309 Free PMC article.
An update on LNCipedia: a database for annotated human lncRNA sequences.
Volders PJ, Verheggen K, Menschaert G, Vandepoele K, Martens L, Vandesompele J, Mestdagh P. Volders PJ, et al. Among authors: vandepoele k. Nucleic Acids Res. 2015 Jan;43(Database issue):D174-80. doi: 10.1093/nar/gku1060. Epub 2014 Nov 5. Nucleic Acids Res. 2015. PMID: 25378313 Free PMC article.
189 results