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LTR-mediated retroposition as a mechanism of RNA-based duplication in metazoans.
Tan S, Cardoso-Moreira M, Shi W, Zhang D, Huang J, Mao Y, Jia H, Zhang Y, Chen C, Shao Y, Leng L, Liu Z, Huang X, Long M, Zhang YE. Tan S, et al. Among authors: shao y. Genome Res. 2016 Dec;26(12):1663-1675. doi: 10.1101/gr.204925.116. Epub 2016 Oct 20. Genome Res. 2016. PMID: 27934698 Free PMC article.
Gene expression across mammalian organ development.
Cardoso-Moreira M, Halbert J, Valloton D, Velten B, Chen C, Shao Y, Liechti A, Ascenção K, Rummel C, Ovchinnikova S, Mazin PV, Xenarios I, Harshman K, Mort M, Cooper DN, Sandi C, Soares MJ, Ferreira PG, Afonso S, Carneiro M, Turner JMA, VandeBerg JL, Fallahshahroudi A, Jensen P, Behr R, Lisgo S, Lindsay S, Khaitovich P, Huber W, Baker J, Anders S, Zhang YE, Kaessmann H. Cardoso-Moreira M, et al. Among authors: shao y. Nature. 2019 Jul;571(7766):505-509. doi: 10.1038/s41586-019-1338-5. Epub 2019 Jun 26. Nature. 2019. PMID: 31243369 Free PMC article.
Genome-wide analysis of pseudogenes reveals HBBP1's human-specific essentiality in erythropoiesis and implication in β-thalassemia.
Ma Y, Liu S, Gao J, Chen C, Zhang X, Yuan H, Chen Z, Yin X, Sun C, Mao Y, Zhou F, Shao Y, Liu Q, Xu J, Cheng L, Yu D, Li P, Yi P, He J, Geng G, Guo Q, Si Y, Zhao H, Li H, Banes GL, Liu H, Nakamura Y, Kurita R, Huang Y, Wang X, Wang F, Fang G, Engel JD, Shi L, Zhang YE, Yu J. Ma Y, et al. Among authors: shao y. Dev Cell. 2021 Feb 22;56(4):478-493.e11. doi: 10.1016/j.devcel.2020.12.019. Epub 2021 Jan 20. Dev Cell. 2021. PMID: 33476555 Free article.
Inferring Historical Introgression with Deep Learning.
Zhang Y, Zhu Q, Shao Y, Jiang Y, Ouyang Y, Zhang L, Zhang W. Zhang Y, et al. Among authors: shao y. Syst Biol. 2023 Nov 1;72(5):1013-1038. doi: 10.1093/sysbio/syad033. Syst Biol. 2023. PMID: 37257491
8,942 results