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Development of a fixed module repertoire for the analysis and interpretation of blood transcriptome data.
Nat Commun. 2021 Jul 19;12(1):4385. doi: 10.1038/s41467-021-24584-w.
Nat Commun. 2021.
PMID: 34282143
Free PMC article.
A new method for evaluating the impacts of semantic similarity measures on the annotation of gene sets.
Ayllón-Benítez A, Mougin F, Allali J, Thiébaut R, Thébault P.
Ayllón-Benítez A, et al.
PLoS One. 2018 Nov 27;13(11):e0208037. doi: 10.1371/journal.pone.0208037. eCollection 2018.
PLoS One. 2018.
PMID: 30481204
Free PMC article.
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GSAn: an alternative to enrichment analysis for annotating gene sets.
Ayllon-Benitez A, Bourqui R, Thébault P, Mougin F.
Ayllon-Benitez A, et al.
NAR Genom Bioinform. 2020 Mar 14;2(2):lqaa017. doi: 10.1093/nargab/lqaa017. eCollection 2020 Jun.
NAR Genom Bioinform. 2020.
PMID: 33575577
Free PMC article.
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EPPO ontology: a semantic-driven approach for plant and pest codes representation.
Ayllón-Benitez A, Bernabé-Diaz JA, Espinoza-Arias P, Esnaola-Gonzalez I, Beeckman DSA, McCaig B, Hanzlik K, Cools T, Castro Iragorri C, Palacios N.
Ayllón-Benitez A, et al.
Front Artif Intell. 2023 Jun 19;6:1131667. doi: 10.3389/frai.2023.1131667. eCollection 2023.
Front Artif Intell. 2023.
PMID: 37404339
Free PMC article.
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