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Development of a fixed module repertoire for the analysis and interpretation of blood transcriptome data.
Altman MC, Rinchai D, Baldwin N, Toufiq M, Whalen E, Garand M, Syed Ahamed Kabeer B, Alfaki M, Presnell SR, Khaenam P, Ayllón-Benítez A, Mougin F, Thébault P, Chiche L, Jourde-Chiche N, Phillips JT, Klintmalm G, O'Garra A, Berry M, Bloom C, Wilkinson RJ, Graham CM, Lipman M, Lertmemongkolchai G, Bedognetti D, Thiebaut R, Kheradmand F, Mejias A, Ramilo O, Palucka K, Pascual V, Banchereau J, Chaussabel D. Altman MC, et al. Among authors: whalen e. Nat Commun. 2021 Jul 19;12(1):4385. doi: 10.1038/s41467-021-24584-w. Nat Commun. 2021. PMID: 34282143 Free PMC article.
A transcriptomic reporter assay employing neutrophils to measure immunogenic activity of septic patients' plasma.
Khaenam P, Rinchai D, Altman MC, Chiche L, Buddhisa S, Kewcharoenwong C, Suwannasaen D, Mason M, Whalen E, Presnell S, Susaengrat W, O'Brien K, Nguyen QA, Gersuk V, Linsley PS, Lertmemongkolchai G, Chaussabel D. Khaenam P, et al. Among authors: whalen e. J Transl Med. 2014 Mar 11;12:65. doi: 10.1186/1479-5876-12-65. J Transl Med. 2014. PMID: 24612859 Free PMC article.
Modular transcriptional repertoire analyses of adults with systemic lupus erythematosus reveal distinct type I and type II interferon signatures.
Chiche L, Jourde-Chiche N, Whalen E, Presnell S, Gersuk V, Dang K, Anguiano E, Quinn C, Burtey S, Berland Y, Kaplanski G, Harle JR, Pascual V, Chaussabel D. Chiche L, et al. Among authors: whalen e. Arthritis Rheumatol. 2014 Jun;66(6):1583-95. doi: 10.1002/art.38628. Arthritis Rheumatol. 2014. PMID: 24644022 Free PMC article.
An interactive web application for the dissemination of human systems immunology data.
Speake C, Presnell S, Domico K, Zeitner B, Bjork A, Anderson D, Mason MJ, Whalen E, Vargas O, Popov D, Rinchai D, Jourde-Chiche N, Chiche L, Quinn C, Chaussabel D. Speake C, et al. Among authors: whalen e. J Transl Med. 2015 Jun 19;13:196. doi: 10.1186/s12967-015-0541-x. J Transl Med. 2015. PMID: 26088622 Free PMC article.
Transcriptomic evidence for modulation of host inflammatory responses during febrile Plasmodium falciparum malaria.
Tran TM, Jones MB, Ongoiba A, Bijker EM, Schats R, Venepally P, Skinner J, Doumbo S, Quinten E, Visser LG, Whalen E, Presnell S, O'Connell EM, Kayentao K, Doumbo OK, Chaussabel D, Lorenzi H, Nutman TB, Ottenhoff TH, Haks MC, Traore B, Kirkness EF, Sauerwein RW, Crompton PD. Tran TM, et al. Among authors: whalen e. Sci Rep. 2016 Aug 10;6:31291. doi: 10.1038/srep31291. Sci Rep. 2016. PMID: 27506615 Free PMC article.
Interferon response to respiratory syncytial virus by bronchial epithelium from children with asthma is inversely correlated with pulmonary function.
Altman MC, Reeves SR, Parker AR, Whalen E, Misura KM, Barrow KA, James RG, Hallstrand TS, Ziegler SF, Debley JS. Altman MC, et al. Among authors: whalen e. J Allergy Clin Immunol. 2018 Aug;142(2):451-459. doi: 10.1016/j.jaci.2017.10.004. Epub 2017 Oct 26. J Allergy Clin Immunol. 2018. PMID: 29106997 Free PMC article.
Allergen-induced activation of natural killer cells represents an early-life immune response in the development of allergic asthma.
Altman MC, Whalen E, Togias A, O'Connor GT, Bacharier LB, Bloomberg GR, Kattan M, Wood RA, Presnell S, LeBeau P, Jaffee K, Visness CM, Busse WW, Gern JE. Altman MC, et al. Among authors: whalen e. J Allergy Clin Immunol. 2018 Dec;142(6):1856-1866. doi: 10.1016/j.jaci.2018.02.019. Epub 2018 Mar 5. J Allergy Clin Immunol. 2018. PMID: 29518416 Free PMC article.
191 results