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A chickpea genetic variation map based on the sequencing of 3,366 genomes.
Varshney RK, Roorkiwal M, Sun S, Bajaj P, Chitikineni A, Thudi M, Singh NP, Du X, Upadhyaya HD, Khan AW, Wang Y, Garg V, Fan G, Cowling WA, Crossa J, Gentzbittel L, Voss-Fels KP, Valluri VK, Sinha P, Singh VK, Ben C, Rathore A, Punna R, Singh MK, Tar'an B, Bharadwaj C, Yasin M, Pithia MS, Singh S, Soren KR, Kudapa H, Jarquín D, Cubry P, Hickey LT, Dixit GP, Thuillet AC, Hamwieh A, Kumar S, Deokar AA, Chaturvedi SK, Francis A, Howard R, Chattopadhyay D, Edwards D, Lyons E, Vigouroux Y, Hayes BJ, von Wettberg E, Datta SK, Yang H, Nguyen HT, Wang J, Siddique KHM, Mohapatra T, Bennetzen JL, Xu X, Liu X. Varshney RK, et al. Among authors: sun s. Nature. 2021 Nov;599(7886):622-627. doi: 10.1038/s41586-021-04066-1. Epub 2021 Nov 10. Nature. 2021. PMID: 34759320 Free PMC article.
Population genomic data reveal genes related to important traits of quail.
Wu Y, Zhang Y, Hou Z, Fan G, Pi J, Sun S, Chen J, Liu H, Du X, Shen J, Hu G, Chen W, Pan A, Yin P, Chen X, Pu Y, Zhang H, Liang Z, Jian J, Zhang H, Wu B, Sun J, Chen J, Tao H, Yang T, Xiao H, Yang H, Zheng C, Bai M, Fang X, Burt DW, Wang W, Li Q, Xu X, Li C, Yang H, Wang J, Yang N, Liu X, Du J. Wu Y, et al. Among authors: sun s, sun j. Gigascience. 2018 May 1;7(5):giy049. doi: 10.1093/gigascience/giy049. Gigascience. 2018. PMID: 29762663 Free PMC article.
The first chromosome-level genome for a marine mammal as a resource to study ecology and evolution.
Fan G, Zhang Y, Liu X, Wang J, Sun Z, Sun S, Zhang H, Chen J, Lv M, Han K, Tan X, Hu J, Guan R, Fu Y, Liu S, Chen X, Xu Q, Qin Y, Liu L, Bai J, Wang O, Tang J, Lu H, Shang Z, Wang B, Hu G, Zhao X, Zou Y, Chen A, Gong M, Zhang W, Lee SM, Li S, Liu J, Li Z, Lu Y, Sabir JSM, Sabir MJ, Khan M, Hajrah NH, Yin Y, Kristiansen K, Yang H, Wang J, Xu X, Liu X. Fan G, et al. Among authors: sun s, sun z. Mol Ecol Resour. 2019 Jul;19(4):944-956. doi: 10.1111/1755-0998.13003. Epub 2019 May 9. Mol Ecol Resour. 2019. PMID: 30735609
Resequencing 545 ginkgo genomes across the world reveals the evolutionary history of the living fossil.
Zhao YP, Fan G, Yin PP, Sun S, Li N, Hong X, Hu G, Zhang H, Zhang FM, Han JD, Hao YJ, Xu Q, Yang X, Xia W, Chen W, Lin HY, Zhang R, Chen J, Zheng XM, Lee SM, Lee J, Uehara K, Wang J, Yang H, Fu CX, Liu X, Xu X, Ge S. Zhao YP, et al. Among authors: sun s. Nat Commun. 2019 Sep 13;10(1):4201. doi: 10.1038/s41467-019-12133-5. Nat Commun. 2019. PMID: 31519986 Free PMC article.
The Chromosome Level Genome and Genome-wide Association Study for the Agronomic Traits of Panax Notoginseng.
Fan G, Liu X, Sun S, Shi C, Du X, Han K, Yang B, Fu Y, Liu M, Seim I, Zhang H, Xu Q, Wang J, Su X, Shao L, Zhu Y, Shao Y, Zhao Y, Wong AK, Zhuang D, Chen W, Zhang G, Yang H, Xu X, Tsui SK, Liu X, Lee SM. Fan G, et al. Among authors: sun s. iScience. 2020 Sep 8;23(9):101538. doi: 10.1016/j.isci.2020.101538. eCollection 2020 Sep 25. iScience. 2020. PMID: 33083766 Free PMC article.
An Indo-Pacific Humpback Dolphin Genome Reveals Insights into Chromosome Evolution and the Demography of a Vulnerable Species.
Zhang P, Zhao Y, Li C, Lin M, Dong L, Zhang R, Liu M, Li K, Zhang H, Liu X, Zhang Y, Yuan Y, Liu H, Seim I, Sun S, Du X, Chang Y, Li F, Liu S, Lee SM, Wang K, Wang D, Wang X, McGowen MR, Jefferson TA, Olsen MT, Stiller J, Zhang G, Xu X, Yang H, Fan G, Liu X, Li S. Zhang P, et al. Among authors: sun s. iScience. 2020 Oct 3;23(10):101640. doi: 10.1016/j.isci.2020.101640. eCollection 2020 Oct 23. iScience. 2020. PMID: 33103078 Free PMC article.
Robust Benchmark Structural Variant Calls of An Asian Using State-of-the-art Long-read Sequencing Technologies.
Du X, Li L, Liang F, Liu S, Zhang W, Sun S, Sun Y, Fan F, Wang L, Liang X, Qiu W, Fan G, Wang O, Yang W, Zhang J, Xiao Y, Wang Y, Wang D, Qu S, Chen F, Huang J. Du X, et al. Among authors: sun s, sun y. Genomics Proteomics Bioinformatics. 2022 Feb;20(1):192-204. doi: 10.1016/j.gpb.2020.10.006. Epub 2021 Mar 2. Genomics Proteomics Bioinformatics. 2022. PMID: 33662625 Free PMC article.
The Chinese mitten crab genome provides insights into adaptive plasticity and developmental regulation.
Cui Z, Liu Y, Yuan J, Zhang X, Ventura T, Ma KY, Sun S, Song C, Zhan D, Yang Y, Liu H, Fan G, Cai Q, Du J, Qin J, Shi C, Hao S, Fitzgibbon QP, Smith GG, Xiang J, Chan TY, Hui M, Bao C, Li F, Chu KH. Cui Z, et al. Among authors: sun s. Nat Commun. 2021 Apr 22;12(1):2395. doi: 10.1038/s41467-021-22604-3. Nat Commun. 2021. PMID: 33888695 Free PMC article.
Comparative analysis of clonal evolution among patients with right- and left-sided colon and rectal cancer.
Banerjee S, Zhang X, Kuang S, Wang J, Li L, Fan G, Luo Y, Sun S, Han P, Wu Q, Yang S, Ji X, Li Y, Deng L, Tian X, Wang Z, Zhang Y, Wu K, Zhu S, Bolund L, Yang H, Xu X, Liu J, Lu Y, Liu X. Banerjee S, et al. Among authors: sun s. iScience. 2021 Jun 11;24(7):102718. doi: 10.1016/j.isci.2021.102718. eCollection 2021 Jul 23. iScience. 2021. PMID: 34258553 Free PMC article.
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